RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SCN7AQ01118 1682 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 DNM2P50570 870 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 WDR59Q6PJI9 974 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 NEK11Q8NG66 645 aa11.8□□□□□ -0.52
CUL4A-201ENST00000326335 NAPGQ99747 312 aaPredicted RBP11.8□□□□□ -0.52
CUL4A-201ENST00000326335 TISP43B9A030 160 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 TBCAO75347 108 aaKnown RBP11.79□□□□□ -0.52
CUL4A-201ENST00000326335 TADA3O75528 432 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
CUL4A-201ENST00000326335 CASP4P49662 377 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CUL4A-201ENST00000326335 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
CUL4A-201ENST00000326335 MYH1P12882 1939 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
CUL4A-201ENST00000326335 C2orf54Q08AI8 447 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 COG2Q14746 738 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 DAGLBQ8NCG7 672 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 AK8Q96MA6 479 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 REEP2Q9BRK0 252 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
CUL4A-201ENST00000326335 FTCDO95954 541 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 GOLGA1Q92805 767 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 SPAG5Q96R06 1193 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 ZNF70Q9UC06 446 aaPredicted RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 HERVK_113P62684 666 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 KIF5AQ12840 1032 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 VWA3BQ502W6 1294 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 UNC13DQ70J99 1090 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 CCDC17Q96LX7 622 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 PNKPQ96T60 521 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 RUSC1Q9BVN2 902 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 MSH4O15457 936 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 GAS7O60861 476 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 PBX1P40424 430 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 C15orf52Q6ZUT6 534 aaKnown RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
CUL4A-201ENST00000326335 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
CUL4A-201ENST00000326335 CTAGE15A4D2H0 777 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 LAD1O00515 517 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 NFIBO00712 420 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 FLOT1O75955 427 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 CTAGE8P0CG41 777 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 ARP10275 920 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 SLC9A1P19634 815 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 SOX10P56693 466 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 ARHGAP44Q17R89 818 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 DNAJC21Q5F1R6 531 aaKnown RBP11.77□□□□□ -0.52
CUL4A-201ENST00000326335 CTAGE6Q86UF2 777 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 CTAGE4Q8IX94 777 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 KRT222Q8N1A0 295 aa11.77□□□□□ -0.52
CUL4A-201ENST00000326335 DHX36Q9H2U1 1008 aaKnown RBP11.77□□□□□ -0.52
CUL4A-201ENST00000326335 TRIM49P0CI25 452 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 TRIM49CP0CI26 452 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.53
CUL4A-201ENST00000326335 PRPHP41219 470 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 RASA3Q14644 834 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 ZKSCAN4Q969J2 545 aaPredicted RBP11.77□□□□□ -0.53
CUL4A-201ENST00000326335 MS4A14Q96JA4 679 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 C7orf25Q9BPX7 421 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 MYH10P35580 1976 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 RASSF10A6NK89 507 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 LRRN2O75325 713 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 FAM13AO94988 1023 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 CYP11B2P19099 503 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 HOOK2Q96ED9 719 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 THAP9Q9H5L6 903 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 MYO6Q9UM54 1294 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
CUL4A-201ENST00000326335 GOLGA8IPA6NC78 632 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 GOLGA8JA6NMD2 632 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 INPP5BP32019 993 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
CUL4A-201ENST00000326335 MAGEA1P43355 309 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
CUL4A-201ENST00000326335 CCDC93Q567U6 631 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms