RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 M0R2N6 131 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 NDUFAB1O14561 156 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 LRRC63Q05C16 580 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 ADAT2Q7Z6V5 191 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 CREG2Q8IUH2 290 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 SPATA31A5Q5VU36 1347 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 SPATA31A7Q8IWB4 1347 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 CLIC2O15247 247 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 HLA-DOAP06340 250 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 PLA2G4BP0C869 781 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 TAL1P17542 331 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 IBSPP21815 317 aaPredicted RBP14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 PDXDC1Q6P996 788 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 PACSIN1Q9BY11 444 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 FGFBP2Q9BYJ0 223 aa14.2□□□□□ -0.14
HMGCS1-201ENST00000325110 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 MTMR4Q9NYA4 1195 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 MYH10P35580 1976 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 PVALEFA0A1B0GWK0 134 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 KLRC1P26715 233 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 CARSP49589 748 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 TTC31Q49AM3 519 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 RNF187Q5TA31 235 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 EMILIN3Q9NT22 766 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 TIAM2Q8IVF5 1701 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 PRPF6O94906 941 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 AP1M1Q9BXS5 423 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 SIK3Q9Y2K2 1263 aa14.19□□□□□ -0.14
HMGCS1-201ENST00000325110 TARSL2A2RTX5 802 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 KIAA0754O94854 1291 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 TTLL1O95922 423 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 EPHB4P54760 987 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 ECM1Q16610 540 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 ASPRV1Q53RT3 343 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 SLC30A10Q6XR72 485 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 DHX37Q8IY37 1157 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 ARL8AQ96BM9 186 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 DAGLAQ9Y4D2 1042 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 GOLGB1Q14789 3259 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 PPFIA4O75335 1185 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 MYH14Q7Z406 1995 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 GCNT3O95395 438 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 ABCB4P21439 1286 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 TM4SF1P30408 202 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 PPP4CP60510 307 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 RDH13Q8NBN7 331 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 RIC8AQ9NPQ8 531 aa14.18□□□□□ -0.14
HMGCS1-201ENST00000325110 A0A087X0T9 212 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 ATP2C2O75185 946 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 SERPINB2P05120 415 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 FAM228BP0C875 321 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 GOPCQ9HD26 462 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 ARMCX3Q9UH62 379 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 ATP2B4P23634 1241 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 UBXN2AP68543 259 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 KCNH2Q12809 1159 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 CEP85LQ5SZL2 805 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 RBM17Q96I25 401 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 TLR10Q9BXR5 811 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 VIPAS39Q9H9C1 493 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 PKD2L1Q9P0L9 805 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
HMGCS1-201ENST00000325110 GPR75-ASB3A0A0A6YYF3 556 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 A0A1W2PQJ5 194 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 SERPING1P05155 500 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 HOXA13P31271 388 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 USP8P40818 1118 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 PAK2Q13177 524 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 UBLCP1Q8WVY7 318 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 NT5C3AQ9H0P0 336 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 BCL9LQ86UU0 1499 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 GDF11O95390 407 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 SLC9A1P19634 815 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 NNTQ13423 1086 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 HAUS3Q68CZ6 603 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 SMIM23A6NLE4 172 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 GLI1P08151 1106 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 TNNC1P63316 161 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 U2AF1L4Q8WU68 220 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 CEP72Q9P209 647 aa14.16□□□□□ -0.14
HMGCS1-201ENST00000325110 POLLQ9UGP5 575 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms