RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 KATNAL1Q9BW62 490 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 TEX13BQ9BXU2 312 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 A6NNZ2 444 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 ARL4AP40617 200 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 MXI1P50539 228 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 RNASE9P60153 205 aaKnown RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 TUBB8Q3ZCM7 444 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 BSPRYQ5W0U4 402 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 PPP4R3CPQ6ZMV5 832 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 MARCH10Q8NA82 808 aaPredicted RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 PI4K2BQ8TCG2 481 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 RAVER2Q9HCJ3 691 aaKnown RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 ANAPC5Q9UJX4 755 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 HMGB1P1B2RPK0 211 aaPredicted RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 DYNC1I1O14576 645 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 HEXIM1O94992 359 aaKnown RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 MMP1P03956 469 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 PHBP35232 272 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 TSPY1Q01534 308 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 PAK2Q13177 524 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 PNOCQ13519 176 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 MTMR3Q13615 1198 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 GCOM2Q9BZD3 368 aaPredicted RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 MRPL47Q9HD33 250 aaKnown RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 DCP1AQ9NPI6 582 aaPredicted RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 CDC42BPBQ9Y5S2 1711 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 PTPRMP28827 1452 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 ABCB4P21439 1286 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 EEF1GP26641 437 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 ALX1Q15699 326 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 ANKRD13AQ8IZ07 590 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 AGBL3Q8NEM8 1001 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 RNF17Q9BXT8 1623 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 RGS12O14924 1447 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 WDR46O15213 610 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 RECQLP46063 649 aaPredicted RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 SCRN1Q12765 414 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 KYAT1Q16773 422 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 ARL13BQ3SXY8 428 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 C4orf50Q6ZRC1 276 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 TRMT44Q8IYL2 757 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 RYBPQ8N488 228 aaPredicted RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 TMEM47Q9BQJ4 181 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 MSTO1Q9BUK6 570 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 CBX8Q9HC52 389 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD28-201ENST00000324106 MTMR6Q9Y217 621 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 CD163L1Q9NR16 1453 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 SLC25A27O95847 323 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 CDC42BPAQ5VT25 1732 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 HHIPL2Q6UWX4 724 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 TIGD1Q96MW7 591 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 PLA2G12BQ9BX93 195 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 PIDD1Q9HB75 910 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 PCDHA6Q9UN73 950 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 PCDHA8Q9Y5H6 950 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 AFPP02771 609 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 MARK3P27448 753 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 MAN1A1P33908 653 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 POLR2FP61218 127 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 PALM2Q8IXS6 379 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 RASGRP4Q8TDF6 673 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 KIF9Q9HAQ2 790 aa9.75□□□□□ -0.85
CD28-201ENST00000324106 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
CD28-201ENST00000324106 RFX7Q2KHR2 1363 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 RHOXF2BP0C7M4 288 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 SLFN14P0C7P3 912 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 PLA2G4BP0C869 781 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 HOXA13P31271 388 aaPredicted RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 TGFB2P61812 414 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 ZNF667Q5HYK9 610 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 RNF219Q5W0B1 726 aaPredicted RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 TMTC3Q6ZXV5 915 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 BEST2Q8NFU1 509 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 CDKL2Q92772 493 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 RUNDC3BQ96NL0 473 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 RHOXF2Q9BQY4 288 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.74□□□□□ -0.85
CD28-201ENST00000324106 TYW1Q9NV66 732 aaKnown RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 CYP2D7A0A087X1C5 515 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 ERICH4A6NGS2 130 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 CLDN3O15551 220 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 SEC24BO95487 1268 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 TPD52P55327 224 aaPredicted RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 BFSP1Q12934 665 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 LONRF2Q1L5Z9 754 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 FAM151AQ8WW52 585 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 FAM84BQ96KN1 310 aaPredicted RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 MXD3Q9BW11 206 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 GGA3Q9NZ52 723 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 PCDHA7Q9UN72 937 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms