RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CYP27A1Q02318 531 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 PDXDC1Q6P996 788 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 PPP4R3CPQ6ZMV5 832 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 NOA1Q8NC60 698 aaKnown RBP24.74■■□□□ 1.55
PNKP-201ENST00000322344 TRIM58Q8NG06 486 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 BAP1Q92560 729 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 IFIH1Q9BYX4 1025 aaKnown RBP24.74■■□□□ 1.55
PNKP-201ENST00000322344 TANGO6Q9C0B7 1094 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 DEF6Q9H4E7 631 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 SYNPO2Q9UMS6 1093 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 PCDHA13Q9Y5I0 950 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 PCDHAC2Q9Y5I4 1007 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 ZNF263O14978 683 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 GPS2Q13227 327 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 SYDE2Q5VT97 1194 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 RRAGAQ7L523 313 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 ETNPPLQ8TBG4 499 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 HDAC6Q9UBN7 1215 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 COL2A1P02458 1487 aaPredicted RBP24.74■■□□□ 1.55
PNKP-201ENST00000322344 LRRC53A6NM62 1247 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 TACC1O75410 805 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 OAS2P29728 719 aaKnown RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 EIF4A3P38919 411 aaKnown RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 HERC4Q5GLZ8 1057 aaPredicted RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 CACNA2D4Q7Z3S7 1137 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 TEX2Q8IWB9 1127 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 ZC3H3Q8IXZ2 948 aaKnown RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 SYN2Q92777 582 aaPredicted RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 FAM20AQ96MK3 541 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 SSU72P8A0A1W2PR75 194 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 SPDYE3A6NKU9 549 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 AKR1B10O60218 316 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 NDUFB10O96000 172 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 SREBF1P36956 1147 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 VSNL1P62760 191 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 MAPK8IP2Q13387 824 aaPredicted RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 SHROOM1Q2M3G4 852 aaPredicted RBP24.73■■□□□ 1.55
PNKP-201ENST00000322344 BTNL9Q6UXG8 535 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 SH2D4AQ9H788 454 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 CEP72Q9P209 647 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 FAM184BQ9ULE4 1060 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 L1RE1Q9UN81 338 aa24.73■■□□□ 1.55
PNKP-201ENST00000322344 MED24O75448 989 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 KRT18P05783 430 aaKnown RBP24.72■■□□□ 1.55
PNKP-201ENST00000322344 PLEKP08567 350 aaPredicted RBP24.72■■□□□ 1.55
PNKP-201ENST00000322344 USP14P54578 494 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 SLC12A3P55017 1021 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 EDRF1Q3B7T1 1238 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 IQCEQ6IPM2 695 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 ABCB6Q9NP58 842 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 EMILIN3Q9NT22 766 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 JRKLQ9Y4A0 524 aa24.72■■□□□ 1.55
PNKP-201ENST00000322344 EIF3JO75822 258 aaKnown RBP24.71■■□□□ 1.55
PNKP-201ENST00000322344 BMP3P12645 472 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 SPIRE1Q08AE8 756 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 KCNMA1Q12791 1236 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 RBM26Q5T8P6 1007 aaKnown RBP24.71■■□□□ 1.55
PNKP-201ENST00000322344 ZHX1Q9UKY1 873 aaPredicted RBP24.71■■□□□ 1.55
PNKP-201ENST00000322344 ZNF646O15015 1829 aaPredicted RBP24.71■■□□□ 1.55
PNKP-201ENST00000322344 MACROD2A1Z1Q3 448 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 TARSL2A2RTX5 802 aaKnown RBP24.71■■□□□ 1.55
PNKP-201ENST00000322344 APBA3O96018 575 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 RPA1P27694 616 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 CIITAP33076 1130 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 TRAF1Q13077 416 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 PRR16Q569H4 304 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 KRT26Q7Z3Y9 468 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 TRIM59Q8IWR1 403 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 SCFD1Q8WVM8 642 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 MMS19Q96T76 1030 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 KCTD10Q9H3F6 313 aa24.71■■□□□ 1.55
PNKP-201ENST00000322344 PJA2O43164 708 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 GDF11O95390 407 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 STAT3P40763 770 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 IKQ13123 557 aaPredicted RBP24.7■■□□□ 1.54
PNKP-201ENST00000322344 KCTD17Q8N5Z5 321 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 CNKSR1Q969H4 720 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 TBC1D7Q9P0N9 293 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 DNM3Q9UQ16 869 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 DUSP10Q9Y6W6 482 aa24.7■■□□□ 1.54
PNKP-201ENST00000322344 PRLRP16471 622 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 ALS2CR12Q96Q35 445 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.69■■□□□ 1.54
PNKP-201ENST00000322344 MAGEA1P43355 309 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 ASTE1Q2TB18 679 aaPredicted RBP24.69■■□□□ 1.54
PNKP-201ENST00000322344 ARSHQ5FYA8 562 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 CATSPER3Q86XQ3 398 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 NELFCDQ8IXH7 590 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 SYT2Q8N9I0 419 aaPredicted RBP24.69■■□□□ 1.54
PNKP-201ENST00000322344 LENG9Q96B70 501 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 FGFBP2Q9BYJ0 223 aa24.69■■□□□ 1.54
PNKP-201ENST00000322344 NPHP3-ACAD11A0A0J9YXS1 232 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 POTEFA5A3E0 1075 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 POLR3GO15318 223 aaPredicted RBP24.68■■□□□ 1.54
PNKP-201ENST00000322344 POTEIP0CG38 1075 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 POTEGQ6S5H5 508 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 POTEEQ6S8J3 1075 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 CAGE1Q8TC20 777 aa24.68■■□□□ 1.54
PNKP-201ENST00000322344 SMCR8Q8TEV9 937 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms