RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 KCNK3O14649 394 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TLR2O60603 784 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TSPY3P0CV98 308 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TSPY8P0CW00 308 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 HSPA9P38646 679 aaKnown RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 PPP1R2P41236 205 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 POLR2FP61218 127 aaKnown RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TNNC1P63316 161 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 SV2BQ7L1I2 683 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 ARFGAP2Q8N6H7 521 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 INPP4AQ96PE3 977 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 OSBPL7Q9BZF2 842 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TAF1DQ9H5J8 278 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 ODF2LQ9ULJ1 636 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 COL22A1Q8NFW1 1626 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 SSU72P8A0A1W2PR75 194 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 SCP2P22307 547 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TXKP42681 527 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 SF3A3Q12874 501 aaKnown RBP eCLIP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 NAB2Q15742 525 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 UBLCP1Q8WVY7 318 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 CALML4Q96GE6 196 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 MCM8Q9UJA3 840 aa17.92■□□□□ 0.46
CACFD1-202ENST00000316948 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.92■□□□□ 0.46
CACFD1-202ENST00000316948 LAD1O00515 517 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 ELF1P32519 619 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 PRPHP41219 470 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 E2F5Q15329 346 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 DIXDC1Q155Q3 683 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 SNCBQ16143 134 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 MEI1Q5TIA1 1274 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 USP38Q8NB14 1042 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 TAF4BQ92750 862 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 AK8Q96MA6 479 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 MMTAG2Q9BU76 263 aaKnown RBP17.91■□□□□ 0.46
CACFD1-202ENST00000316948 AP1M1Q9BXS5 423 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 ADAMTS1Q9UHI8 967 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 MYH1P12882 1939 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 RAPGEF1Q13905 1077 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 FAM83BQ5T0W9 1011 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 CYB5D1Q6P9G0 228 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 DNAAF5Q86Y56 855 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 PARP9Q8IXQ6 854 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 LSM14BQ9BX40 385 aaKnown RBP17.91■□□□□ 0.46
CACFD1-202ENST00000316948 PLCB1Q9NQ66 1216 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 A0A087X0T9 212 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 GRID2IPA4D2P6 1211 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 FGFR1OPO95684 399 aaKnown RBP17.91■□□□□ 0.46
CACFD1-202ENST00000316948 FAM228BP0C875 321 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 PLCB4Q15147 1175 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 UAP1Q16222 522 aaPredicted RBP17.91■□□□□ 0.46
CACFD1-202ENST00000316948 TMED8Q6PL24 325 aaPredicted RBP17.91■□□□□ 0.46
CACFD1-202ENST00000316948 BANK1Q8NDB2 785 aa17.91■□□□□ 0.46
CACFD1-202ENST00000316948 CASZ1Q86V15 1759 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 CEP104O60308 925 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 SERPING1P05155 500 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 NAPAP54920 295 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 ZNF844Q08AG5 666 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 FUKQ8N0W3 1084 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 DAGLBQ8NCG7 672 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 LUC7LQ9NQ29 371 aaKnown RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 SAP30BPQ9UHR5 308 aaKnown RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 NOVA2Q9UNW9 492 aaKnown RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 LEMD3Q9Y2U8 911 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 COL14A1Q05707 1796 aaKnown RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 GNAQP50148 359 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 SEC16BQ96JE7 1060 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 ISCUQ9H1K1 167 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 NEUROG2Q9H2A3 272 aa17.9■□□□□ 0.46
CACFD1-202ENST00000316948 CNOT8Q9UFF9 292 aaKnown RBP17.9■□□□□ 0.46
CACFD1-202ENST00000316948 RREB1Q92766 1687 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 DCDC2CA8MYV0 355 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 KLRF2D3W0D1 207 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 FLT3P36888 993 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 GRIK5Q16478 980 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 LRRC55Q6ZSA7 311 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 ZNF444Q8N0Y2 327 aaPredicted RBP17.89■□□□□ 0.45
CACFD1-202ENST00000316948 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 CDK5RAP3Q96JB5 506 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 ACTR5Q9H9F9 607 aaPredicted RBP17.89■□□□□ 0.45
CACFD1-202ENST00000316948 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 SLC12A6Q9UHW9 1150 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 GGA2Q9UJY4 613 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 PHF20L1A8MW92 1017 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 ECHS1P30084 290 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 RPS6KA1Q15418 735 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 ANKRD20A8PQ5CZ79 823 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 FAM133AQ8N9E0 248 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 FBXL5Q9UKA1 691 aa17.89■□□□□ 0.45
CACFD1-202ENST00000316948 CCDC88AQ3V6T2 1871 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms