RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ZNF112Q9UJU3 913 aa20.43■□□□□ 0.86
CCDC43-201ENST00000315286 A0A1W2PQC6 194 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 SOWAHDA6NJG2 315 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 NKRFO15226 690 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 ZSCAN12O43309 604 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 PSMD10O75832 226 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 FLOT1O75955 427 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 TPM1P09493 284 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 MYOCDQ8IZQ8 938 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 SYT2Q8N9I0 419 aaPredicted RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 SLC5A5Q92911 643 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 POLR3CQ9BUI4 534 aaPredicted RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 FGFBP2Q9BYJ0 223 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 RAVER2Q9HCJ3 691 aaKnown RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 RGL1Q9NZL6 768 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 COL20A1Q9P218 1284 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 PCDHA2Q9Y5H9 948 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 MTIF2P46199 727 aaKnown RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 DNM2P50570 870 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 TRIM14Q14142 442 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 ARHGAP27Q6ZUM4 889 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 APOBEC3FQ8IUX4 373 aaKnown RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 SCYL3Q8IZE3 742 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 KIF18AQ8NI77 898 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 CCDC51Q96ER9 411 aa20.42■□□□□ 0.86
CCDC43-201ENST00000315286 NAA15Q9BXJ9 866 aaKnown RBP20.42■□□□□ 0.86
CCDC43-201ENST00000315286 KRT18P05783 430 aaKnown RBP20.41■□□□□ 0.86
CCDC43-201ENST00000315286 ARP10275 920 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 ALAS1P13196 640 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 LRRC63Q05C16 580 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 HERC4Q5GLZ8 1057 aaPredicted RBP20.41■□□□□ 0.86
CCDC43-201ENST00000315286 TSC1Q92574 1164 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.868e-6■■□□□ 12.8
CCDC43-201ENST00000315286 WRNIP1Q96S55 665 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 RPAP3Q9H6T3 665 aaPredicted RBP20.41■□□□□ 0.86
CCDC43-201ENST00000315286 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 FRMD3A2A2Y4 597 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 MIIPQ5JXC2 388 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 RAD9BQ6WBX8 426 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 SYT10Q6XYQ8 523 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 HSD17B14Q9BPX1 270 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 DESI2Q9BSY9 194 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 NOC4LQ9BVI4 516 aaKnown RBP20.41■□□□□ 0.86
CCDC43-201ENST00000315286 ABHD10Q9NUJ1 306 aa20.41■□□□□ 0.86
CCDC43-201ENST00000315286 PITPNM2Q9BZ72 1349 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 FECHP22830 423 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 USP14P54578 494 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 BACE1P56817 501 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 PPP2R5CQ13362 524 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 GIT2Q14161 759 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 HOMER2Q9NSB8 354 aa20.4■□□□□ 0.86
CCDC43-201ENST00000315286 CHMP2AO43633 222 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 PTPRAP18433 802 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 KRT9P35527 623 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 EPS15P42566 896 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 HIRAP54198 1017 aaPredicted RBP20.39■□□□□ 0.86
CCDC43-201ENST00000315286 TBC1D8BQ0IIM8 1120 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 CTTNQ14247 550 aaKnown RBP20.39■□□□□ 0.86
CCDC43-201ENST00000315286 TRIM65Q6PJ69 517 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 MCF2L2Q86YR7 1114 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 ZNF577Q9BSK1 485 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 ZHX3Q9H4I2 956 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 GGA3Q9NZ52 723 aa20.39■□□□□ 0.86
CCDC43-201ENST00000315286 POLR2AP24928 1970 aaKnown RBP20.39■□□□□ 0.86
CCDC43-201ENST00000315286 TTC26A0AVF1 554 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 GAS7O60861 476 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 SLITRK3O94933 977 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 ETF1P62495 437 aaKnown RBP20.39■□□□□ 0.85
CCDC43-201ENST00000315286 ZCWPW2Q504Y3 356 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 FOXR2Q6PJQ5 311 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 GPC2Q8N158 579 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 ZNF280CQ8ND82 737 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 TSG101Q99816 390 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 MXRA8Q9BRK3 442 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 BHMT2Q9H2M3 363 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 PICK1Q9NRD5 415 aa20.39■□□□□ 0.85
CCDC43-201ENST00000315286 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
CCDC43-201ENST00000315286 FGFR1OPO95684 399 aaKnown RBP20.38■□□□□ 0.85
CCDC43-201ENST00000315286 ITGB5P18084 799 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 LMNB1P20700 586 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
CCDC43-201ENST00000315286 GHRHRQ02643 423 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 SCFD1Q8WVM8 642 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 DYDC2Q96IM9 177 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 REEP2Q9BRK0 252 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 TUFT1Q9NNX1 390 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 RPTORQ8N122 1335 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 EYA4O95677 639 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 TUBB4AP04350 444 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 TPH2Q8IWU9 490 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 IL31RAQ8NI17 732 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 AS3MTQ9HBK9 375 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 RABGAP1Q9Y3P9 1069 aa20.38■□□□□ 0.85
CCDC43-201ENST00000315286 RBBP6Q7Z6E9 1792 aaKnown RBP20.37■□□□□ 0.85
CCDC43-201ENST00000315286 PARP14Q460N5 1801 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms