RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 EPN3Q9H201 632 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 SMARCAL1Q9NZC9 954 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 EHD2Q9NZN4 543 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 AIPL1Q9NZN9 384 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.23■□□□□ 0.03
MKS1-201ENST00000313863 BZW2Q9Y6E2 419 aaKnown RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 NRAPQ86VF7 1730 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 NKRFO15226 690 aaKnown RBP eCLIP15.23■□□□□ 0.03
MKS1-201ENST00000313863 GCFC2P16383 781 aaKnown RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 NR1D1P20393 614 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 ANXA13P27216 316 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 CARSP49589 748 aaKnown RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 SETQ01105 290 aaPredicted RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 COASYQ13057 564 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PDCLQ13371 301 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 CUL1Q13616 776 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 ASIC2Q16515 512 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 TBC1D9BQ66K14 1250 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 MAPKAPK5Q8IW41 473 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
MKS1-201ENST00000313863 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 ATP6V1G3Q96LB4 118 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 VAT1LQ9HCJ6 419 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 PANK4Q9NVE7 773 aa15.23■□□□□ 0.03
MKS1-201ENST00000313863 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 HSPA9P38646 679 aaKnown RBP15.22■□□□□ 0.03
MKS1-201ENST00000313863 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
MKS1-201ENST00000313863 KLHL30Q0D2K2 578 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 OTUD6BQ8N6M0 293 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 TBC1D5Q92609 795 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 LRRC45Q96CN5 670 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 INPP4AQ96PE3 977 aaPredicted RBP15.22■□□□□ 0.03
MKS1-201ENST00000313863 KRT12Q99456 494 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 SAP30BPQ9UHR5 308 aaKnown RBP15.22■□□□□ 0.03
MKS1-201ENST00000313863 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
MKS1-201ENST00000313863 MARCH6O60337 910 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 NOL4O94818 638 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 LSP1P33241 339 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 NOVP48745 357 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 RAPGEF1Q13905 1077 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 KIAA0753Q2KHM9 967 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 SWT1Q5T5J6 900 aaKnown RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.21■□□□□ 0.03
MKS1-201ENST00000313863 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 TMEM260Q9NX78 707 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 NARFQ9UHQ1 456 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 AHDC1Q5TGY3 1603 aaPredicted RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 MEFVO15553 781 aaPredicted RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 SLC37A4O43826 429 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 MRPS25P82663 173 aaKnown RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 RPS6KA1Q15418 735 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 HYIQ5T013 277 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 TXNRD3Q86VQ6 643 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 TEX11Q8IYF3 940 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 C3orf20Q8ND61 904 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 CASKIN2Q8WXE0 1202 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 CALR3Q96L12 384 aaKnown RBP15.21■□□□□ 0.03
MKS1-201ENST00000313863 ISCUQ9H1K1 167 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 ANKIB1Q9P2G1 1089 aa15.21■□□□□ 0.03
MKS1-201ENST00000313863 POTEMA6NI47 508 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 TLR2O60603 784 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 PPP1R37O75864 691 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 FSBPO95073 299 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 TDP2O95551 362 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 FTCDO95954 541 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 KRT14P02533 472 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 KLRC1P26715 233 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 ATP2B2Q01814 1243 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 LRRC41Q15345 812 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 EDRF1Q3B7T1 1238 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 C15orf52Q6ZUT6 534 aaKnown RBP15.2■□□□□ 0.02
MKS1-201ENST00000313863 CNPY4Q8N129 248 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 LMBR1Q8WVP7 490 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 RTFDC1Q9BY42 306 aaPredicted RBP15.2■□□□□ 0.02
MKS1-201ENST00000313863 EHD4Q9H223 541 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 PLIN4Q96Q06 1357 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 CETN3O15182 167 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 MYBP10242 640 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 ATP1A2P50993 1020 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 DRP2Q13474 957 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
MKS1-201ENST00000313863 DIXDC1Q155Q3 683 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms