RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PDE11AQ9HCR9 933 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 XDHP47989 1333 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 MYO1FO00160 1098 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 GADD45BO75293 160 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TRADDQ15628 312 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 KLHL38Q2WGJ6 581 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 EDRF1Q3B7T1 1238 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ZNF449Q6P9G9 518 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ST13P4Q8IZP2 240 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 FAM227BQ96M60 508 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 MGEA5O60502 916 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TJP3O95049 919 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 GCNT3O95395 438 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ZNF662Q6ZS27 426 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 PIK3AP1Q6ZUJ8 805 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ROPN1BQ9BZX4 212 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ROPN1Q9HAT0 212 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 PYGBP11216 843 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SPARCL1Q14515 664 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
COL6A5-202ENST00000312481 CACTINQ8WUQ7 758 aaKnown RBP9.54□□□□□ -0.88
COL6A5-202ENST00000312481 ABHD10Q9NUJ1 306 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 TOM1O60784 492 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 KRT37O76014 449 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 RNF8O76064 485 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 ECEL1O95672 775 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 GSTA1P08263 222 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 GOLGA8IPA6NC78 632 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 MAF1Q9H063 256 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 COMMD10Q9Y6G5 202 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 TMEM232C9JQI7 657 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PPARGP37231 505 aaPredicted RBP9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SLC12A2P55011 1212 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 DBNDD2Q9BQY9 259 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PANK4Q9NVE7 773 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PCSK2P16519 638 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 CCDC87Q9NVE4 849 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PHKG2P15735 406 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 HSPA13P48723 471 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 ADRM1Q16186 407 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SGSM3Q96HU1 749 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 ANGPTL3Q9Y5C1 460 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
COL6A5-202ENST00000312481 A0A0D9SFI3 127 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SPECC1L-ADORA2AF8WAN1 911 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 TOMM70O94826 608 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SETD3Q86TU7 594 aaPredicted RBP9.54□□□□□ -0.88
COL6A5-202ENST00000312481 ZBTB8OSQ8IWT0 167 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 SLF1Q9BQI6 1058 aa9.54□□□□□ -0.88
COL6A5-202ENST00000312481 BBOX1O75936 387 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 JAK3P52333 1124 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 CDC42EP1Q00587 391 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 TAF1DQ9H5J8 278 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 ATP8B3O60423 1300 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 MCF2LO15068 1137 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 KRT10P13645 584 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PDIK1LQ8N165 341 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 IL1RAPL1Q9NZN1 696 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 KCNK3O14649 394 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 CCDC22O60826 627 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 CC2D1AQ6P1N0 951 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 XRRA1Q6P2D8 792 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PPP1R9AQ9ULJ8 1098 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 METP08581 1390 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PSMD14O00487 310 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 ORC4O43929 436 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 KRT38O76015 456 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 GRM1Q13255 1194 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 FMR1NBQ8N0W7 255 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 ZMYND12Q9H0C1 365 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PARVGQ9HBI0 331 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 RPL26L1Q9UNX3 145 aaKnown RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 SMCO2A6NFE2 343 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 ZFXP17010 805 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 USP11P51784 963 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 MCPH1Q8NEM0 835 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 ABCF3Q9NUQ8 709 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PACSIN2Q9UNF0 486 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 PNOCQ13519 176 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 TRIM6Q9C030 488 aaPredicted RBP9.53□□□□□ -0.88
COL6A5-202ENST00000312481 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
COL6A5-202ENST00000312481 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms