RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MEIS1O00470 390 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 CCNE2O96020 404 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 CEP55Q53EZ4 464 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
SCFD1-201ENST00000311943 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 ELP1O95163 1332 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 STK36Q9NRP7 1315 aa13.74□□□□□ -0.21
SCFD1-201ENST00000311943 MARK3P27448 753 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 GNA11P29992 359 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 ZNF76P36508 570 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 AP3B2Q13367 1082 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 KRT40Q6A162 431 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 PLA2G4DQ86XP0 818 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 PCYT2Q99447 389 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 RNPEPQ9H4A4 650 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 HDAC6Q9UBN7 1215 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 SCN10AQ9Y5Y9 1956 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 A0A0U1RQG5 324 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 SLC37A4O43826 429 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 CYP2C18P33260 490 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-201ENST00000311943 OSBPL7Q9BZF2 842 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
SCFD1-201ENST00000311943 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 CDKL5O76039 1030 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 FOSP01100 380 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-201ENST00000311943 CD4P01730 458 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 LGALS2P05162 132 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 CLTBP09497 229 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-201ENST00000311943 CCL23P55773 120 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 ANKRD33Q7Z3H0 272 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 NLRX1Q86UT6 975 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 TNFRSF25Q93038 417 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
SCFD1-201ENST00000311943 GPRASP2Q96D09 838 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
SCFD1-201ENST00000311943 KIF28PB7ZC32 967 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 TGFB3P10600 412 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 DGKDQ16760 1214 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 C9orf50Q5SZB4 431 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 C1orf53Q5VUE5 145 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 CCDC12Q8WUD4 166 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-201ENST00000311943 SCLYQ96I15 445 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 GDF15Q99988 308 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 PRO3102Q9H379 93 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 EYSQ5T1H1 3165 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
SCFD1-201ENST00000311943 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.21
SCFD1-201ENST00000311943 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.22
SCFD1-201ENST00000311943 MSH4O15457 936 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 F2P00734 622 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 ACRP10323 421 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 ATP2B1P20020 1258 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 PSEN2P49810 448 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 NBR1Q14596 966 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 MFSD10Q14728 455 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.22
SCFD1-201ENST00000311943 VWCEQ96DN2 955 aa13.71□□□□□ -0.22
SCFD1-201ENST00000311943 HAS3O00219 553 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 MMP1P03956 469 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 CYP3A4P08684 503 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
SCFD1-201ENST00000311943 NEDD9Q14511 834 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
SCFD1-201ENST00000311943 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 SETD4Q9NVD3 440 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
SCFD1-201ENST00000311943 H3BRB1 525 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 IPO5O00410 1097 aaKnown RBP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 ST18O60284 1047 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 ZEB2O60315 1214 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 EIF5BO60841 1220 aaKnown RBP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 STAM2O75886 525 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 CSF2RAP15509 400 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 ACTR2P61160 394 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 TRAPPC12Q8WVT3 735 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 ZNF577Q9BSK1 485 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 TUT1Q9H6E5 874 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms