RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 BIN2Q9UBW5 565 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 AMACRQ9UHK6 382 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 NEBLO76041 1014 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 PAX7P23759 505 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 PLCB4Q15147 1175 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 RUFY4Q6ZNE9 571 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 TSG101Q99816 390 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 CRNKL1Q9BZJ0 848 aaKnown RBP16.11■□□□□ 0.17
COL6A2-202ENST00000310645 SLC24A3Q9HC58 644 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
COL6A2-202ENST00000310645 TLDC2A0PJX2 215 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 PPP1R2P41236 205 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 PPP2R5AQ15172 486 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 NONOQ15233 471 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL6A2-202ENST00000310645 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 MKNK2Q9HBH9 465 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 EPS15P42566 896 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
COL6A2-202ENST00000310645 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 STXBP3O00186 592 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 ORC4O43929 436 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 ITGA4P13612 1032 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 DHX9Q08211 1270 aaKnown RBP16.1■□□□□ 0.17
COL6A2-202ENST00000310645 DRP2Q13474 957 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 EMC10Q5UCC4 262 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 TCP11Q8WWU5 503 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 AK8Q96MA6 479 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
COL6A2-202ENST00000310645 MAGEF1Q9HAY2 307 aa16.1■□□□□ 0.17
COL6A2-202ENST00000310645 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 POTEMA6NI47 508 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 M0R2N6 131 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 KRIT1O00522 736 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 SLC18A3Q16572 532 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
COL6A2-202ENST00000310645 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
COL6A2-202ENST00000310645 ANKS1AQ92625 1134 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 SH3GLB2Q9NR46 395 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 DUOX1Q9NRD9 1551 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 H0YGN5 161 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 MECOMQ03112 1051 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 CEP72Q9P209 647 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 NFS1Q9Y697 457 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 LAD1O00515 517 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 C21orf2O43822 256 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 SKAP2O75563 359 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-202ENST00000310645 NOL4O94818 638 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 CLTAP09496 248 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 FGRP09769 529 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 ECHS1P30084 290 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 PRPHP41219 470 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-202ENST00000310645 GRB10Q13322 594 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 DDX12PQ92771 950 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 SELENOSQ9BQE4 189 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
COL6A2-202ENST00000310645 TNS2Q63HR2 1409 aa16.08■□□□□ 0.17
COL6A2-202ENST00000310645 CTNND1O60716 968 aaKnown RBP16.08■□□□□ 0.16
COL6A2-202ENST00000310645 WLSQ5T9L3 541 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 LRIG3Q6UXM1 1119 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 NEK8Q86SG6 692 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
COL6A2-202ENST00000310645 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 CLGNO14967 610 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 TTI1O43156 1089 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 KIF4AO95239 1232 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 PRDX5P30044 214 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 ASIC2Q16515 512 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 NUDT12Q9BQG2 462 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL6A2-202ENST00000310645 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL6A2-202ENST00000310645 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
COL6A2-202ENST00000310645 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 ACTN1P12814 892 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 BYSLQ13895 437 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 ACCSLQ4AC99 568 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 UHMK1Q8TAS1 419 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 GJA10Q969M2 543 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 COL18A1P39060 1754 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 BIRC3Q13489 604 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms