RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 LRCH2Q5VUJ6 765 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 TRIM65Q6PJ69 517 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NEK8Q86SG6 692 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 SGMS1Q86VZ5 419 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 LRRN4CLQ8ND94 238 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 MMP19Q99542 508 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 TEX13BQ9BXU2 312 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 SPATC1LQ9H0A9 340 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NUP62CLQ9H1M0 184 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 BHMT2Q9H2M3 363 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 PRDM5Q9NQX1 630 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 DDX19AQ9NUU7 478 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 TMEM51Q9NW97 253 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 MYH8P13535 1937 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NR3C2P08235 984 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 KCTD19Q17RG1 926 aaPredicted RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 ASPRV1Q53RT3 343 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 EP400NLQ6ZTU2 488 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 NLRX1Q86UT6 975 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 SMC1BQ8NDV3 1235 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 NLRP4Q96MN2 994 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 RBM28Q9NW13 759 aaKnown RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 GABRQQ9UN88 632 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 LTBP1Q14766 1721 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 PITPNM2Q9BZ72 1349 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 SMC2O95347 1197 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 TXNP10599 105 aaKnown RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 FCER1AP12319 257 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 DNA2P51530 1060 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 TMEM266Q2M3C6 531 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 GNASQ5JWF2 1037 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 RRAGBQ5VZM2 374 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 SMYD5Q6GMV2 418 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 TATDN1Q6P1N9 297 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 CCDC148Q8NFR7 591 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 RNF26Q9BY78 433 aaPredicted RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 PCIF1Q9H4Z3 704 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 BARHL2Q9NY43 387 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 NYAP2Q9P242 653 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 RBPJLQ9UBG7 517 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 PCDHA4Q9UN74 947 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 GGPS1O95749 300 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 PFKFB1P16118 471 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 OSBPP22059 807 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 LBX1P52954 281 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 MTMR1Q13613 665 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 PTPROQ16827 1216 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 XKR9Q5GH70 373 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 CXCL17Q6UXB2 119 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 LRRC8AQ8IWT6 810 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 GLIS3Q8NEA6 775 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 GPRC5AQ8NFJ5 357 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 CRACR2AQ9BSW2 395 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 POLR3EQ9NVU0 708 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 KCNH3Q9ULD8 1083 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 PPP1R9AQ9ULJ8 1098 aa5.52□□□□□ -1.53
CAST-201ENST00000309190 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
CAST-201ENST00000309190 EP300Q09472 2414 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 ANKRD62A6NC57 917 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 GOLGA8IPA6NC78 632 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 GOLGA8JA6NMD2 632 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 CLIC2O15247 247 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 PRPF3O43395 683 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 DDAH1O94760 285 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 ZNF202O95125 648 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 MYL3P08590 195 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 PRR29P0C7W0 189 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 FECHP22830 423 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TYRO3Q06418 890 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 LRMPQ12912 555 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 C11orf57Q6ZUT1 292 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 PARP9Q8IXQ6 854 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 CEP57L1Q8IYX8 460 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TMEM143Q96AN5 459 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 SEPT9Q9UHD8 586 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 RCOR1Q9UKL0 485 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 DUOX1Q9NRD9 1551 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 A6NJR5 290 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 SMTNL1A8MU46 457 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 RSPH10B2B2RC85 870 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 IPO5O00410 1097 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 UPP2O95045 317 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 RSPH10BP0C881 870 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 SSTR3P32745 418 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 USP14P54578 494 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 FAM193AP78312 1265 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 PRKCZQ05513 592 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 NAA30Q147X3 362 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 HERC4Q5GLZ8 1057 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 FAM102BQ5T8I3 360 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 APTXQ7Z2E3 356 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 SESTD1Q86VW0 696 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 MRPL11Q9Y3B7 192 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 AFG3L2Q9Y4W6 797 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 ZDBF2Q9HCK1 2354 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TXLNAP40222 546 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms