RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 SNAP25P60880 206 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 COASYQ13057 564 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 PLS1Q14651 629 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 DAAM2Q86T65 1068 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
RUNX3-201ENST00000308873 CCT8L2Q96SF2 557 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
RUNX3-201ENST00000308873 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.19
RUNX3-201ENST00000308873 POTEB3A0JP26 581 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 SFI1A8K8P3 1242 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 POTECB2RU33 542 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 NR2F2P24468 414 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.19
RUNX3-201ENST00000308873 E2F5Q15329 346 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 POTEBQ6S5H4 581 aa16.27■□□□□ 0.19
RUNX3-201ENST00000308873 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.19
RUNX3-201ENST00000308873 MYH7P12883 1935 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 SLC9A1P19634 815 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 RASA1P20936 1047 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
RUNX3-201ENST00000308873 ATP8A1Q9Y2Q0 1164 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 PPP1R37O75864 691 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 SERPING1P05155 500 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 GUCY2CP25092 1073 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 KSR1Q8IVT5 923 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 ZNF473Q8WTR7 871 aaKnown RBP16.26■□□□□ 0.19
RUNX3-201ENST00000308873 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 KRT13P13646 458 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
RUNX3-201ENST00000308873 RDH13Q8NBN7 331 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 RAD54LQ92698 747 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 ZMYND12Q9H0C1 365 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 BCL9O00512 1426 aa16.26■□□□□ 0.19
RUNX3-201ENST00000308873 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 CETN3O15182 167 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 DAPK3O43293 454 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 MAP2K2P36507 400 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 PPP1R2P41236 205 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 NFIXQ14938 502 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
RUNX3-201ENST00000308873 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 NLRP14Q86W24 1093 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 GIMAP7Q8NHV1 300 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.25■□□□□ 0.19
RUNX3-201ENST00000308873 GRIN2DO15399 1336 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 GJB7Q6PEY0 223 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 ANKRD2Q9GZV1 360 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 MYH6P13533 1939 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 GALNT17Q6IS24 598 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 BAP1Q92560 729 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 ATP6V1G3Q96LB4 118 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
RUNX3-201ENST00000308873 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 LDHCP07864 332 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 PRPHP41219 470 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 LRRC63Q05C16 580 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 KCNH2Q12809 1159 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 PHRF1Q9P1Y6 1649 aaKnown RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 PALM3A6NDB9 673 aaPredicted RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 ECM1Q16610 540 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 CCDC25Q86WR0 208 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 PURBQ96QR8 312 aaKnown RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 MAGEF1Q9HAY2 307 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 EMILIN3Q9NT22 766 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 G3V3G9 751 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 TLR2O60603 784 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 UFL1O94874 794 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 PTK2Q05397 1052 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
RUNX3-201ENST00000308873 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
RUNX3-201ENST00000308873 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 DHX9Q08211 1270 aaKnown RBP16.23■□□□□ 0.19
RUNX3-201ENST00000308873 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
RUNX3-201ENST00000308873 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 ALKBH5Q6P6C2 394 aaKnown RBP16.23■□□□□ 0.19
RUNX3-201ENST00000308873 POTEGQ6S5H5 508 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
RUNX3-201ENST00000308873 MDM1Q8TC05 714 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms