RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DNAJC7Q99615 494 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 VPS16Q9H269 839 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 HPCAL4Q9UM19 191 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 PSME4Q14997 1843 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 KLHL33A6NCF5 533 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 IRX1P78414 480 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 IL17AQ16552 155 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 FOXR1Q6PIV2 292 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 HERC5Q9UII4 1024 aaKnown RBP11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 HACL1Q9UJ83 578 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 DGKZQ13574 1117 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 GPATCH4Q5T3I0 446 aaKnown RBP11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 COG1Q8WTW3 980 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 TMEM60Q9H2L4 133 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 SAR1BQ9Y6B6 198 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 TRAPPC10P48553 1259 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 KRT83P78385 493 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 USH1GQ495M9 461 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 CHP1Q99653 195 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 PGAP2Q9UHJ9 254 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZBTB21Q9ULJ3 1066 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 CAPN11Q9UMQ6 739 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 GUCA1BQ9UMX6 200 aa11.43□□□□□ -0.58
APOBEC3F-201ENST00000308521 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 EPS15P42566 896 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZNF280AP59817 542 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 UBXN1Q04323 297 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 QRICH1Q2TAL8 776 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 MB21D1Q8N884 522 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 RNF217Q8TC41 542 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 STAMQ92783 540 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZBTB5O15062 677 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCNT1O60563 726 aaKnown RBP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 SHOX2O60902 331 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 PHACTR2O75167 634 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 HERVK_113P62684 666 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 STIM1Q13586 685 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 NBPF12Q5TAG4 269 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 USP17L6PQ6QN14 398 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 FAM83AQ86UY5 434 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 FMNL3Q8IVF7 1028 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZNF507Q8TCN5 953 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 RUBCNQ92622 972 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 DEFB129Q9H1M3 183 aa11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 LUC7L2Q9Y383 392 aaKnown RBP11.42□□□□□ -0.58
APOBEC3F-201ENST00000308521 TTC26A0AVF1 554 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 ANO9A1A5B4 782 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 PP2D1A8MPX8 630 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 RPN1P04843 607 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 BMP3P12645 472 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 EEF1GP26641 437 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 SMARCA1P28370 1054 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 GNA11P29992 359 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 MEA1Q16626 185 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 ANGEL2Q5VTE6 544 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 REXO1Q8N1G1 1221 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 MTRQ99707 1265 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 PCDHA1Q9Y5I3 950 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 SMCHD1A6NHR9 2005 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 ATXN2Q99700 1313 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 ERLIN2O94905 339 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 ATP1A1P05023 1023 aaKnown RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 CAP2P40123 477 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 MNAT1P51948 309 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 PRKG1Q13976 671 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCNI2Q6ZMN8 369 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 IRF2BP1Q8IU81 584 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 C4orf32Q8N8J7 132 aa11.41□□□□□ -0.58
APOBEC3F-201ENST00000308521 PLIN2Q99541 437 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms