RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ABCC12Q96J65 1359 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 DPYSL4O14531 572 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 RNF8O76064 485 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 MCM6Q14566 821 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 DAAM2Q86T65 1068 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 HAUS1Q96CS2 278 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 PPLO60437 1756 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SFI1A8K8P3 1242 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 MTIF3Q9H2K0 278 aaKnown RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 PRELPP51888 382 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 CUL4BQ13620 913 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 FAM186BQ8IYM0 893 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 RARBP10826 455 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 CD58P19256 250 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 SURF1Q15526 300 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 MED7O43513 233 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 KCNA4P22459 653 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 CMA1P23946 247 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 RINT1Q6NUQ1 792 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 TRMT2AQ8IZ69 625 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 SIX6OS1Q8N1H7 587 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 AMFRQ9UKV5 643 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 KIF28PB7ZC32 967 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 IFIH1Q9BYX4 1025 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 GOLGA8IPA6NC78 632 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 GOLGA8JA6NMD2 632 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 OPA1O60313 960 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 AKR1B1P15121 316 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 NSFP46459 744 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 GTF2A2P52657 109 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 PRPSAP1Q14558 356 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 ARFGAP3Q9NP61 516 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 NOLC1Q14978 699 aaKnown RBP eCLIP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 MAPK6Q16659 721 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 TBC1D10CQ8IV04 446 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 OSBPL3Q9H4L5 887 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 UPP2O95045 317 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 CDC25AP30304 524 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 CLUL1Q15846 466 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 OR6B3Q8NGW1 331 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 TBC1D22BQ9NU19 505 aa11.67□□□□□ -0.54
SYNPO2-201ENST00000307142 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 FDX1P10109 184 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 GYS1P13807 737 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 GPRC5AQ8NFJ5 357 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 GABBR1Q9UBS5 961 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 DCCP43146 1447 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 PLCG1P19174 1290 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 PTPROQ16827 1216 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 ARMCX2Q7L311 632 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 THNSL1Q8IYQ7 743 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 KDM6AO15550 1401 aaPredicted RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 FLT1P17948 1338 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 TBC1D8O95759 1140 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 BPIFB4P59827 614 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 TSTA3Q13630 321 aaPredicted RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 ZNF568Q3ZCX4 644 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 SLFN12LQ6IEE8 588 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 BBS5Q8N3I7 341 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 BNIP3LO60238 219 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 MAIP1Q8WWC4 291 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 IRAK4Q9NWZ3 460 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 CLDN3O15551 220 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 NTSR2O95665 410 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 SLC4A1P02730 911 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms