RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TMBIM4Q9HC24 238 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 LAD1O00515 517 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 CSF1RP07333 972 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 VSIG1Q86XK7 387 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 REXO1Q8N1G1 1221 aaKnown RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 NAP1L3Q99457 506 aaPredicted RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 NOD2Q9HC29 1040 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 A0A1W2PRG0 241 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 TROAPQ12815 778 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 ADAM9Q13443 819 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 BIRC2Q13490 618 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 KCTD19Q17RG1 926 aaPredicted RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 NAIF1Q69YI7 327 aaPredicted RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 YTHDF3Q7Z739 585 aaKnown RBP14.24□□□□□ -0.13
TRIM35-201ENST00000305364 DAAM1Q9Y4D1 1078 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 MYH8P13535 1937 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-201ENST00000305364 DDR1Q08345 913 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CRYMQ14894 314 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ALKBH5Q6P6C2 394 aaKnown RBP14.23□□□□□ -0.13
TRIM35-201ENST00000305364 NSMCE1Q8WV22 266 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 DUSP9Q99956 384 aaKnown RBP14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CPVLQ9H3G5 476 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CEP72Q9P209 647 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 PNMA2Q9UL42 364 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 KLRF2D3W0D1 207 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 HIP1RO75146 1068 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CHRNDQ07001 517 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 TRADDQ15628 312 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 IQCKQ8N0W5 287 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 USP38Q8NB14 1042 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ARMC2Q8NEN0 867 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 FAM167BQ9BTA0 163 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CCSER1Q9C0I3 900 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 YIPF3Q9GZM5 350 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ATP6V0A2Q9Y487 856 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-201ENST00000305364 LRRC63Q05C16 580 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ANKRD20A8PQ5CZ79 823 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 LRIG3Q6UXM1 1119 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 SAAL1Q96ER3 474 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 HOMER3Q9NSC5 361 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 PANK4Q9NVE7 773 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 TCRBV5S4A2TA0A5A2 114 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ZNF263O14978 683 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 FGGP02679 453 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 CDK17Q00537 523 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 NEK9Q8TD19 979 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 TBCKQ8TEA7 893 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 P3H4Q92791 437 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 ISCUQ9H1K1 167 aa14.23□□□□□ -0.13
TRIM35-201ENST00000305364 NOC2LQ9Y3T9 749 aaKnown RBP14.23□□□□□ -0.13
TRIM35-201ENST00000305364 PNPLA7Q6ZV29 1317 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 CNTNAP5Q8WYK1 1306 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SMIM22K7EJ46 135 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SETDB1Q15047 1291 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 ZRSR2Q15696 482 aaKnown RBP14.22□□□□□ -0.13
TRIM35-201ENST00000305364 CUL5Q93034 780 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
TRIM35-201ENST00000305364 ZMYND12Q9H0C1 365 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 CCDC188H7C350 402 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 TTI1O43156 1089 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SUN1O94901 812 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SEC23AQ15436 765 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 DDB1Q16531 1140 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 LRP10Q7Z4F1 713 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 LMNTD2Q8IXW0 634 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 PPP1R12CQ9BZL4 782 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 SAP30BPQ9UHR5 308 aaKnown RBP14.22□□□□□ -0.13
TRIM35-201ENST00000305364 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 ENO4A6NNW6 628 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 OPLAHO14841 1288 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 DIAPH2O60879 1101 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 CYP2D6P10635 497 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 EIF3BP55884 814 aaKnown RBP14.22□□□□□ -0.13
TRIM35-201ENST00000305364 FIGNQ5HY92 759 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 KSR1Q8IVT5 923 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 XPO6Q96QU8 1125 aaKnown RBP14.22□□□□□ -0.13
TRIM35-201ENST00000305364 RIC8AQ9NPQ8 531 aa14.22□□□□□ -0.13
TRIM35-201ENST00000305364 EPHB6O15197 1021 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 PRPHP41219 470 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.13
TRIM35-201ENST00000305364 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.13
TRIM35-201ENST00000305364 UNC13DQ70J99 1090 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 CCDC105Q8IYK2 499 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 GDF3Q9NR23 364 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 ARMCX3Q9UH62 379 aaPredicted RBP14.21□□□□□ -0.13
TRIM35-201ENST00000305364 SNX24Q9Y343 169 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 CCT8L1PA6NM43 557 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 CHN1P15882 459 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 ADCY1Q08828 1119 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.13
TRIM35-201ENST00000305364 ZNF662Q6ZS27 426 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 NKIRAS1Q9NYS0 192 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.13
TRIM35-201ENST00000305364 GNA14O95837 355 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms