RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PSMD10O75832 226 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 SMPD1P17405 629 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 PRPHP41219 470 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 LENG1Q96BZ8 264 aaPredicted RBP30.66■■■□□ 2.5
HDAC3-201ENST00000305264 SENP7Q9BQF6 1050 aa30.66■■■□□ 2.5
HDAC3-201ENST00000305264 DDX39AO00148 427 aaKnown RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 CCND3P30281 292 aaPredicted RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 TTC12Q9H892 705 aaPredicted RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 GAS7O60861 476 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 GRIN1Q05586 938 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 ARL6IP4Q66PJ3 421 aaKnown RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 IQSEC1Q6DN90 963 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 CLEC17AQ6ZS10 378 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 KCNG4Q8TDN1 519 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 RIT2Q99578 217 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 FBXO2Q9UK22 296 aaPredicted RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 VAV3Q9UKW4 847 aa30.65■■■□□ 2.5
HDAC3-201ENST00000305264 MORC2Q9Y6X9 1032 aaPredicted RBP30.65■■■□□ 2.5
HDAC3-201ENST00000305264 GGPS1O95749 300 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 TNFAIP2Q03169 654 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 SLC9C1Q4G0N8 1177 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 CYFIP1Q7L576 1253 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 PRDM10Q9NQV6 1147 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 NFASCO94856 1347 aa30.64■■■□□ 2.5
HDAC3-201ENST00000305264 VWA3AA6NCI4 1184 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 DUSP28Q4G0W2 176 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 FBXO46Q6PJ61 603 aaPredicted RBP30.63■■■□□ 2.49
HDAC3-201ENST00000305264 SDF4Q9BRK5 362 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 TBC1D22BQ9NU19 505 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 FAM184BQ9ULE4 1060 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 PCDHA12Q9UN75 941 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 TELO2Q9Y4R8 837 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 PPP6R2O75170 966 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 AKR1A1P14550 325 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 CNGA1P29973 690 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 TECP42680 631 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 SPIRE1Q08AE8 756 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 NEDD9Q14511 834 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 DTHD1Q6ZMT9 781 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 TEKT3Q9BXF9 490 aa30.63■■■□□ 2.49
HDAC3-201ENST00000305264 FARP2O94887 1054 aaPredicted RBP30.62■■■□□ 2.49
HDAC3-201ENST00000305264 CLIC6Q96NY7 704 aa30.62■■■□□ 2.49
HDAC3-201ENST00000305264 JPH1Q9HDC5 661 aaPredicted RBP30.62■■■□□ 2.49
HDAC3-201ENST00000305264 POTEMA6NI47 508 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 CELF3Q5SZQ8 465 aaKnown RBP30.61■■■□□ 2.49
HDAC3-201ENST00000305264 UNC45AQ9H3U1 944 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 GNEQ9Y223 722 aaKnown RBP30.61■■■□□ 2.49
HDAC3-201ENST00000305264 SRPRBQ9Y5M8 271 aaKnown RBP30.61■■■□□ 2.49
HDAC3-201ENST00000305264 SEPT4O43236 478 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 CHMP2AO43633 222 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 ME1P48163 572 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 FXR2P51116 673 aaKnown RBP eCLIP30.61■■■□□ 2.49
HDAC3-201ENST00000305264 SP4Q02446 784 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 ARHGAP1Q07960 439 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 KRI1Q8N9T8 703 aaKnown RBP30.61■■■□□ 2.49
HDAC3-201ENST00000305264 FERMT2Q96AC1 680 aa30.61■■■□□ 2.49
HDAC3-201ENST00000305264 CCNE2O96020 404 aa30.6■■■□□ 2.49
HDAC3-201ENST00000305264 PKN2Q16513 984 aaKnown RBP30.6■■■□□ 2.49
HDAC3-201ENST00000305264 METTL7BQ6UX53 244 aa30.6■■■□□ 2.49
HDAC3-201ENST00000305264 B3GNT9Q6UX72 402 aa30.6■■■□□ 2.49
HDAC3-201ENST00000305264 GIMAP8Q8ND71 665 aaPredicted RBP30.6■■■□□ 2.49
HDAC3-201ENST00000305264 PCDHA7Q9UN72 937 aa30.6■■■□□ 2.49
HDAC3-201ENST00000305264 PPP2R5CQ13362 524 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 TMEM266Q2M3C6 531 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 DHX37Q8IY37 1157 aaKnown RBP30.59■■■□□ 2.49
HDAC3-201ENST00000305264 SLC9A2Q9UBY0 812 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 POTEFA5A3E0 1075 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 GH1P01241 217 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 GBP4Q96PP9 640 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 MLXIPQ9HAP2 919 aa30.59■■■□□ 2.49
HDAC3-201ENST00000305264 NKRFO15226 690 aaKnown RBP eCLIP30.58■■■□□ 2.49
HDAC3-201ENST00000305264 AXDND1Q5T1B0 1012 aaPredicted RBP30.58■■■□□ 2.49
HDAC3-201ENST00000305264 IGSF22Q8N9C0 903 aa30.58■■■□□ 2.49
HDAC3-201ENST00000305264 CSRNP2Q9H175 543 aa30.58■■■□□ 2.49
HDAC3-201ENST00000305264 ELP1O95163 1332 aa30.58■■■□□ 2.49
HDAC3-201ENST00000305264 NCAPH2Q6IBW4 605 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 TLK2Q86UE8 772 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 FRMPD3Q5JV73 1810 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 PP2D1A8MPX8 630 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 EML1O00423 815 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 KRT76Q01546 638 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 HSDL1Q3SXM5 330 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 OR6J1Q8NGC5 347 aa30.57■■■□□ 2.48
HDAC3-201ENST00000305264 HMX1Q9NP08 348 aaPredicted RBP30.57■■■□□ 2.48
HDAC3-201ENST00000305264 MYCP01106 439 aaPredicted RBP30.56■■■□□ 2.48
HDAC3-201ENST00000305264 SPECC1Q5M775 1068 aa30.56■■■□□ 2.48
HDAC3-201ENST00000305264 EMID1Q96A84 441 aaPredicted RBP30.56■■■□□ 2.48
HDAC3-201ENST00000305264 SPATA33Q96N06 139 aa30.56■■■□□ 2.48
HDAC3-201ENST00000305264 ZNF746Q6NUN9 644 aaPredicted RBP30.55■■■□□ 2.48
HDAC3-201ENST00000305264 TMEM87AQ8NBN3 555 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 UNC93B1Q9H1C4 597 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 TCEAL9Q9UHQ7 104 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 DYNC1LI2O43237 492 aaPredicted RBP30.55■■■□□ 2.48
HDAC3-201ENST00000305264 CUTAO60888 179 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 DUSP11O75319 330 aaKnown RBP30.55■■■□□ 2.48
HDAC3-201ENST00000305264 CDC25AP30304 524 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 ACTR2P61160 394 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 LAMC2Q13753 1193 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 MTFR1Q15390 333 aa30.55■■■□□ 2.48
HDAC3-201ENST00000305264 LRWD1Q9UFC0 647 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms