RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 ZFYVE19Q96K21 471 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 EPB41L5Q9HCM4 733 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 PALMDQ9NP74 551 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 RASGRF2O14827 1237 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 ZSCAN20P17040 1043 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 SLCO1A2P46721 670 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 EPHB4P54760 987 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 DNAJC24Q6P3W2 148 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 CACTINQ8WUQ7 758 aaKnown RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 EPAS1Q99814 870 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 EXOC1LA0A1B0GW35 172 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 ARHGEF37A1IGU5 675 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 RNMTO43148 476 aaKnown RBP11.2□□□□□ -0.62
CLIP1-201ENST00000302528 MED7O43513 233 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 SLFN14P0C7P3 912 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 CYP4A11Q02928 519 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 ELMSAN1Q6PJG2 1045 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 ABHD8Q96I13 439 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 EDEM3Q9BZQ6 932 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
CLIP1-201ENST00000302528 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ELF1P32519 619 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 KCTD2Q14681 263 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 TAF1BQ53T94 588 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 NOSTRINQ8IVI9 506 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 NPC1L1Q9UHC9 1359 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 SNX2O60749 519 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 CARSP49589 748 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 OR6B2Q6IFH4 312 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 JPH2Q9BR39 696 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 TRPV6Q9H1D0 765 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZNF263O14978 683 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ALDH1B1P30837 517 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZAP70P43403 619 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 GTF2IP78347 998 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 DRP2Q13474 957 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 KRT24Q2M2I5 525 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 PPP1R2P3Q6NXS1 205 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 TSC22D3Q99576 134 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 IQANK1A0A1B0GTG1 560 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 TADA3O75528 432 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 PLS3P13797 630 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZNF445P59923 1031 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 LRRC47Q8N1G4 583 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 SYTL2Q9HCH5 934 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 DDX28Q9NUL7 540 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 E7EWF7 191 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 IMPG1Q17R60 797 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 RNF219Q5W0B1 726 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 MRPL47Q9HD33 250 aaKnown RBP11.19□□□□□ -0.62
CLIP1-201ENST00000302528 ADGBQ8N7X0 1667 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 VAMP4O75379 141 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 SPATA1Q5VX52 437 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PLEKHM3Q6ZWE6 761 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 MTBPQ96DY7 904 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 CNOT6LQ96LI5 555 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 SOS2Q07890 1332 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 TCP10L2B9ZVM9 353 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PGRMC1O00264 195 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 CREB3O43889 395 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 CRLF3Q8IUI8 442 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 MRFAP1Q9Y605 127 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 ENC1O14682 589 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PAMP19021 973 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 RECQLP46063 649 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 HIF1AQ16665 826 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 ARL13BQ3SXY8 428 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms