RNA–Protein interactions for RNA: ENST00000300056.7

PEX11A-201, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX11A, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-201ENST00000300056 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 DDX12PQ92771 950 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 MTMR9Q96QG7 549 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 NUDT12Q9BQG2 462 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
PEX11A-201ENST00000300056 ISCUQ9H1K1 167 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 LUC7LQ9NQ29 371 aaKnown RBP11.61□□□□□ -0.55
PEX11A-201ENST00000300056 PPANQ9NQ55 473 aaKnown RBP11.61□□□□□ -0.55
PEX11A-201ENST00000300056 COL4A3BPQ9Y5P4 624 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 ROBO3Q96MS0 1386 aa11.61□□□□□ -0.55
PEX11A-201ENST00000300056 POTEMA6NI47 508 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 ARID5AQ03989 594 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 ZNF844Q08AG5 666 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 KCTD19Q17RG1 926 aaPredicted RBP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 SPRED3Q2MJR0 410 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 PROM2Q8N271 834 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 RAD54LQ92698 747 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 TSG101Q99816 390 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 C6orf50Q9HD87 102 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 GCOM1H8Y6P7 765 aaPredicted RBP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 SLC37A4O43826 429 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 MYZAPP0CAP1 466 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 RAPGEF1Q13905 1077 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 SF3B3Q15393 1217 aaKnown RBP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 CALCRLQ16602 461 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 FOXR2Q6PJQ5 311 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 DDX42Q86XP3 938 aaKnown RBP eCLIP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 CDK5RAP3Q96JB5 506 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 SLC40A1Q9NP59 571 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 KLC4Q9NSK0 619 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
PEX11A-201ENST00000300056 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
PEX11A-201ENST00000300056 KCNK3O14649 394 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 CHUKO15111 745 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 GNA11P29992 359 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 FKBP3Q00688 224 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 ENOX2Q16206 610 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 QPCTQ16769 361 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 FGFBP2Q9BYJ0 223 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 XIRP1Q702N8 1843 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TRAF5O00463 557 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TRAPPC3O43617 180 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 EDIL3O43854 480 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TDP2O95551 362 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 DRP2Q13474 957 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 ITPK1Q13572 414 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 MYOCDQ8IZQ8 938 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 REXO1Q8N1G1 1221 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 SCFD2Q8WU76 684 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 DOT1LQ8TEK3 1739 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TMOD1P28289 359 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 COASYQ13057 564 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 CUL1Q13616 776 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 RPS6KA1Q15418 735 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 DZIP1Q86YF9 867 aaKnown RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 SH3RF3Q8TEJ3 882 aaPredicted RBP11.59□□□□□ -0.55
PEX11A-201ENST00000300056 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 TAF4BQ92750 862 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 OSBPL7Q9BZF2 842 aa11.59□□□□□ -0.55
PEX11A-201ENST00000300056 CES2O00748 559 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 KIF4AO95239 1232 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 RASA1P20936 1047 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 CTNNA1P35221 906 aaKnown RBP11.58□□□□□ -0.56
PEX11A-201ENST00000300056 NT5C2P49902 561 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 USP11P51784 963 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 PSMD2Q13200 908 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 PTPROQ16827 1216 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
PEX11A-201ENST00000300056 CCDC121Q6ZUS5 278 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms