RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 KCNMA1Q12791 1236 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 C3orf20Q8ND61 904 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 GLI3P10071 1580 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 TNS3Q68CZ2 1445 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 C5orf60A6NFR6 353 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 CLSTN1O94985 981 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 SERPING1P05155 500 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 CUL1Q13616 776 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 KDM4CQ9H3R0 1056 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 PNMA2Q9UL42 364 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 TLDC2A0PJX2 215 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 CCNT1O60563 726 aaKnown RBP14.28□□□□□ -0.12
TVP23A-201ENST00000299866 DNAJC8O75937 253 aaPredicted RBP14.28□□□□□ -0.12
TVP23A-201ENST00000299866 AMPD3Q01432 767 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 TIAM2Q8IVF5 1701 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 TSPY2A6NKD2 308 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 MYBP10242 640 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 ITGA4P13612 1032 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 XPO6Q96QU8 1125 aaKnown RBP14.28□□□□□ -0.12
TVP23A-201ENST00000299866 PSMD1Q99460 953 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 CELF4Q9BZC1 486 aaKnown RBP14.28□□□□□ -0.12
TVP23A-201ENST00000299866 KCNG1Q9UIX4 513 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 GGT7Q9UJ14 662 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 ATP8A1Q9Y2Q0 1164 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 FLT1P17948 1338 aa14.28□□□□□ -0.12
TVP23A-201ENST00000299866 KRIT1O00522 736 aa14.27□□□□□ -0.12
TVP23A-201ENST00000299866 KLHL30Q0D2K2 578 aa14.27□□□□□ -0.12
TVP23A-201ENST00000299866 NBPF9Q3BBW0 867 aa14.27□□□□□ -0.12
TVP23A-201ENST00000299866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.12
TVP23A-201ENST00000299866 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.12
TVP23A-201ENST00000299866 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.12
TVP23A-201ENST00000299866 CYP2D6P10635 497 aa14.27□□□□□ -0.13
TVP23A-201ENST00000299866 FAM170AA1A519 330 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ANP32DO95626 131 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 FGFR1OPO95684 399 aaKnown RBP14.26□□□□□ -0.13
TVP23A-201ENST00000299866 KIF5BP33176 963 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 PPP1R2P41236 205 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 SV2BQ7L1I2 683 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ELAC2Q9BQ52 826 aaKnown RBP14.26□□□□□ -0.13
TVP23A-201ENST00000299866 CUEDC2Q9H467 287 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 FER1L4A9Z1Z3 1794 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 MYMKA6NI61 221 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 TTI1O43156 1089 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 KIF4AO95239 1232 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 SLC18A3Q16572 532 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 ANKS4BQ8N8V4 417 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 RIOK1Q9BRS2 568 aaKnown RBP14.26□□□□□ -0.13
TVP23A-201ENST00000299866 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 TRAF5O00463 557 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 CAND2O75155 1236 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 GHRP10912 638 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 CHN1P15882 459 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 GYG1P46976 350 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 MTMR3Q13615 1198 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 CALML4Q96GE6 196 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 TMEM59LQ9UK28 342 aa14.26□□□□□ -0.13
TVP23A-201ENST00000299866 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
TVP23A-201ENST00000299866 RBAK-RBAKDNI3L0D1 243 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 NOL4O94818 638 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 MMEP08473 750 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 TXKP42681 527 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 BIRC2Q13490 618 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 SCFD2Q8WU76 684 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 HOOK2Q96ED9 719 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 PANK4Q9NVE7 773 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 CEP72Q9P209 647 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 NOC2LQ9Y3T9 749 aaKnown RBP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 WTIPA6NIX2 430 aaPredicted RBP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 VIMP08670 466 aaKnown RBP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 PAEPP09466 180 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 TMC3Q7Z5M5 1100 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 KIF9Q9HAQ2 790 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 TMOD3Q9NYL9 352 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 F8VZ95 297 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 STARD3NLO95772 234 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 IFNAR2P48551 515 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 ERMARDQ5T6L9 678 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 LRRC34Q8IZ02 419 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms