RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 H3BQF6 201 aa12.38□□□□□ -0.43
IDH3A-201ENST00000299518 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
IDH3A-201ENST00000299518 SCFD1Q8WVM8 642 aa12.38□□□□□ -0.43
IDH3A-201ENST00000299518 TMEM39BQ9GZU3 492 aa12.38□□□□□ -0.43
IDH3A-201ENST00000299518 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
IDH3A-201ENST00000299518 TUBB4AP04350 444 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 CYP11B2P19099 503 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
IDH3A-201ENST00000299518 TERF2Q15554 542 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 FUT8Q9BYC5 575 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
IDH3A-201ENST00000299518 PDIA5Q14554 519 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 MYOCDQ8IZQ8 938 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 LENG9Q96B70 501 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 CCDC42Q96M95 316 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 CLIC2O15247 247 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 MYL1P05976 194 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 MYBP10242 640 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 RNASE9P60153 205 aaKnown RBP12.37□□□□□ -0.43
IDH3A-201ENST00000299518 ZBED6P86452 979 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 EHHADHQ08426 723 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 CCDC40Q4G0X9 1142 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 MAEAQ7L5Y9 396 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 COG1Q8WTW3 980 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 RABGGTAQ92696 567 aa12.37□□□□□ -0.43
IDH3A-201ENST00000299518 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 C2orf54Q08AI8 447 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 TRIM14Q14142 442 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 MEA1Q16626 185 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 ARFGAP3Q9NP61 516 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 GUF1Q8N442 669 aaKnown RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 RAB34Q9BZG1 259 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 FZD1Q9UP38 647 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 BRCA2P51587 3418 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 ZBTB22O15209 634 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 OAS2P29728 719 aaKnown RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 HOXD13P35453 343 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 POLR2FP61218 127 aaKnown RBP12.36□□□□□ -0.43
IDH3A-201ENST00000299518 RASSF7Q02833 373 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 RUSC1Q9BVN2 902 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 DEF6Q9H4E7 631 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.436e-6■■■■■ 48.1
IDH3A-201ENST00000299518 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
IDH3A-201ENST00000299518 MSH4O15457 936 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 TLR2O60603 784 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 MYBL2P10244 700 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CASP4P49662 377 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 KIF11P52732 1056 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.436e-7■■□□□ 13.7
IDH3A-201ENST00000299518 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CTAGE15A4D2H0 777 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 NOL4O94818 638 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CTAGE8P0CG41 777 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 PLS1Q14651 629 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CTAGE6Q86UF2 777 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CTAGE4Q8IX94 777 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 BAP1Q92560 729 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 IFIH1Q9BYX4 1025 aaKnown RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 AKR1B10O60218 316 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 PDE11AQ9HCR9 933 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 EGFRP00533 1210 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 BMP3P12645 472 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 SLC12A3P55017 1021 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 MAN2A1Q16706 1144 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
IDH3A-201ENST00000299518 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
IDH3A-201ENST00000299518 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms