RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 RGL1Q9NZL6 768 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 ZBTB21Q9ULJ3 1066 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 COL24A1Q17RW2 1714 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 CTAGE9A4FU28 777 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 ZBTB39O15060 712 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.62
FOXN4-201ENST00000299162 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
FOXN4-201ENST00000299162 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 TCERG1LQ5VWI1 586 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
FOXN4-201ENST00000299162 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 DNAAF5Q86Y56 855 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 GOLGA5Q8TBA6 731 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 GOLGA1Q92805 767 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
FOXN4-201ENST00000299162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.18□□□□□ -0.62
FOXN4-201ENST00000299162 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 ZMYND10O75800 440 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 RXRBP28702 533 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
FOXN4-201ENST00000299162 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 GOLGA6L9A6NEM1 432 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 MED24O75448 989 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 LAMB1P07942 1786 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 BMP3P12645 472 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 EPS15P42566 896 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 KCNB1Q14721 858 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 DHTKD1Q96HY7 919 aaPredicted RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 EIF3CLB5ME19 914 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 PLA2G4BP0C869 781 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 LIG3P49916 1009 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 DNM2P50570 870 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 COASYQ13057 564 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CTTNQ14247 550 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 DLGAP5Q15398 846 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 FAM26FQ5R3K3 315 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 KSR1Q8IVT5 923 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 C7orf25Q9BPX7 421 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 AMNQ9BXJ7 453 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 LACRTQ9GZZ8 138 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 JADE2Q9NQC1 790 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 RSPH10B2B2RC85 870 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 PSMD14O00487 310 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 AKR1B10O60218 316 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 RSPH10BP0C881 870 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 SNHG28P0DPA3 235 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 KCNJ6P48051 423 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 KIAA1755Q5JYT7 1200 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CAGE1Q8TC20 777 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC42Q96M95 316 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 FUT8Q9BYC5 575 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 THAP9Q9H5L6 903 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 MRFAP1Q9Y605 127 aa11.17□□□□□ -0.62
FOXN4-201ENST00000299162 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 FAM86B1E9PN63 330 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 SORBS3O60504 671 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 FAM86B2P0C5J1 330 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 CXCR5P32302 372 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 MNAT1P51948 309 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 DCAF17Q5H9S7 520 aaPredicted RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 SYDE2Q5VT97 1194 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 WDR59Q6PJI9 974 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 NDST4Q9H3R1 872 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 NHEJ1Q9H9Q4 299 aaPredicted RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 REXO2Q9Y3B8 237 aaKnown RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 LRRC10BA6NIK2 292 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 CLIC2O15247 247 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 BHMT2Q9H2M3 363 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 DHX36Q9H2U1 1008 aaKnown RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 ABCB6Q9NP58 842 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 UBR3Q6ZT12 1888 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 MEIS2O14770 477 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 ZNF185O15231 689 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 RNASE9P60153 205 aaKnown RBP11.16□□□□□ -0.62
FOXN4-201ENST00000299162 CC2D2BQ6DHV5 1058 aa11.16□□□□□ -0.62
FOXN4-201ENST00000299162 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms