RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RNF207Q6ZRF8 634 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 MICU3Q86XE3 530 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 NSUN7Q8NE18 718 aaKnown RBP24.13■■□□□ 1.45
SMCO4-201ENST00000298966 COPS5Q92905 334 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 KAT14Q9H8E8 782 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 PNMA2Q9UL42 364 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 B4DLN1 442 aa24.12■■□□□ 1.45
SMCO4-201ENST00000298966 TXNP10599 105 aaKnown RBP24.12■■□□□ 1.45
SMCO4-201ENST00000298966 MRPL12P52815 198 aaKnown RBP24.12■■□□□ 1.45
SMCO4-201ENST00000298966 FAM184AQ8NB25 1140 aa24.12■■□□□ 1.45
SMCO4-201ENST00000298966 MYH6P13533 1939 aa24.12■■□□□ 1.45
SMCO4-201ENST00000298966 STK36Q9NRP7 1315 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 TOP1P11387 765 aaKnown RBP24.11■■□□□ 1.45
SMCO4-201ENST00000298966 KIF5BP33176 963 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 NFKBIBQ15653 356 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 CLEC17AQ6ZS10 378 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 FANCBQ8NB91 859 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 UBE2ZQ9H832 354 aaPredicted RBP24.11■■□□□ 1.45
SMCO4-201ENST00000298966 SENP2Q9HC62 589 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 CD320Q9NPF0 282 aa24.11■■□□□ 1.45
SMCO4-201ENST00000298966 PARNO95453 639 aaKnown RBP24.1■■□□□ 1.45
SMCO4-201ENST00000298966 SELPP16109 830 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 EDNRBP24530 442 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 GNAQP50148 359 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 TROAPQ12815 778 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 CNKSR3Q6P9H4 555 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 LRRC8DQ7L1W4 858 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 TMCO2Q7Z6W1 182 aaPredicted RBP24.1■■□□□ 1.45
SMCO4-201ENST00000298966 DNERQ8NFT8 737 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 CTCFLQ8NI51 663 aaPredicted RBP24.1■■□□□ 1.45
SMCO4-201ENST00000298966 CLEC4DQ8WXI8 215 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 TNPO1Q92973 898 aaKnown RBP24.1■■□□□ 1.45
SMCO4-201ENST00000298966 TGS1Q96RS0 853 aaKnown RBP24.1■■□□□ 1.45
SMCO4-201ENST00000298966 RAD9AQ99638 391 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 SUGCTQ9HAC7 445 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 GPCPD1Q9NPB8 672 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 MTUS1Q9ULD2 1270 aa24.1■■□□□ 1.45
SMCO4-201ENST00000298966 BRD1O95696 1058 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 IFNAR1P17181 557 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 ERVK-21P61565 698 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 RPS6P62753 249 aaKnown RBP24.09■■□□□ 1.45
SMCO4-201ENST00000298966 DEFB103AP81534 67 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 GJD3Q8N144 294 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 WASF1Q92558 559 aa24.09■■□□□ 1.45
SMCO4-201ENST00000298966 FRMPD2Q68DX3 1309 aaPredicted RBP24.09■■□□□ 1.45
SMCO4-201ENST00000298966 SIP14410 1827 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 PRR33A8MZF0 331 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 STX6O43752 255 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 CTDNEP1O95476 244 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 LEXMQ3ZCV2 418 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 LARP1BQ659C4 914 aaKnown RBP24.08■■□□□ 1.45
SMCO4-201ENST00000298966 GDF6Q6KF10 455 aaPredicted RBP24.08■■□□□ 1.45
SMCO4-201ENST00000298966 ALYREFQ86V81 257 aaKnown RBP24.08■■□□□ 1.45
SMCO4-201ENST00000298966 SESTD1Q86VW0 696 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 TRIM22Q8IYM9 498 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 PNMA1Q8ND90 353 aa24.08■■□□□ 1.45
SMCO4-201ENST00000298966 NCOA5Q9HCD5 579 aaKnown RBP24.08■■□□□ 1.45
SMCO4-201ENST00000298966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.07■■□□□ 1.44
SMCO4-201ENST00000298966 ABHD14A-ACY1A0A1B0GW23 586 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 EFCAB14O75071 495 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 GJB5O95377 273 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 SYT1P21579 422 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 GPNMBQ14956 572 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 FAM178BQ8IXR5 827 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 GBP4Q96PP9 640 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 ATP6V1DQ9Y5K8 247 aa24.07■■□□□ 1.44
SMCO4-201ENST00000298966 CXCL10P02778 98 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 KCNA5P22460 613 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 SSTR3P32745 418 aaPredicted RBP24.06■■□□□ 1.44
SMCO4-201ENST00000298966 NTRK3Q16288 839 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 AFG1LQ8WV93 481 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 TMEM47Q9BQJ4 181 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 LZTS2Q9BRK4 669 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 ZDHHC9Q9Y397 364 aa24.06■■□□□ 1.44
SMCO4-201ENST00000298966 LINC01553A4QN01 128 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 JAK2O60674 1132 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 ARIH2O95376 493 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 GH1P01241 217 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 MMP3P08254 477 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 ALADP13716 330 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 CDC27P30260 824 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 RBL2Q08999 1139 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 PKP1Q13835 747 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 DHX38Q92620 1227 aaKnown RBP24.05■■□□□ 1.44
SMCO4-201ENST00000298966 CTAGE1Q96RT6 745 aa24.05■■□□□ 1.44
SMCO4-201ENST00000298966 RNF26Q9BY78 433 aaPredicted RBP24.05■■□□□ 1.44
SMCO4-201ENST00000298966 FAM217BQ9NTX9 383 aaPredicted RBP24.05■■□□□ 1.44
SMCO4-201ENST00000298966 NBNO60934 754 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 SMARCA1P28370 1054 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 ADD1P35611 737 aaKnown RBP24.04■■□□□ 1.44
SMCO4-201ENST00000298966 SSRP1Q08945 709 aaKnown RBP24.04■■□□□ 1.44
SMCO4-201ENST00000298966 IKBKEQ14164 716 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 GRM4Q14833 912 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.04■■□□□ 1.44
SMCO4-201ENST00000298966 UIMC1Q96RL1 719 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 MYL10Q9BUA6 226 aa24.04■■□□□ 1.44
SMCO4-201ENST00000298966 ORC3Q9UBD5 711 aaPredicted RBP24.04■■□□□ 1.44
SMCO4-201ENST00000298966 ZSCAN22P10073 491 aaPredicted RBP24.03■■□□□ 1.44
SMCO4-201ENST00000298966 CKBP12277 381 aa24.03■■□□□ 1.44
SMCO4-201ENST00000298966 CSPP1Q1MSJ5 1256 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms