RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ADAMTS1Q9UHI8 967 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 ACTN1P12814 892 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 IL1R1P14778 569 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 KLRC1P26715 233 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 EHHADHQ08426 723 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 COBLL1Q53SF7 1204 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 IFT81Q8WYA0 676 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 MEIS1O00470 390 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 IVLP07476 585 aa26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 FKBP3Q00688 224 aaKnown RBP26.93■■□□□ 1.9
SPTSSA-201ENST00000298130 FGFR1OPO95684 399 aaKnown RBP26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 PLCG2P16885 1265 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 CACNB3P54284 484 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 PDIA5Q14554 519 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 KCTD16Q68DU8 428 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 ARL8AQ96BM9 186 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 NOX5Q96PH1 765 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 PSTPIP2Q9H939 334 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 ZNF543Q08ER8 600 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 SFMBT2Q5VUG0 894 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 C8orf74Q6P047 294 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 GPBP1Q86WP2 473 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 LRRC4BQ9NT99 713 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 A0A087X0T9 212 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 LCA5LO95447 670 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 GLI1P08151 1106 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM228BP0C875 321 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 PAFAH1B1P43034 410 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 ASPRV1Q53RT3 343 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 RASSF4Q9H2L5 321 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 RIC8AQ9NPQ8 531 aa26.92■■□□□ 1.9
SPTSSA-201ENST00000298130 PNMA6FA0A0J9YX94 578 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 CASP5P51878 434 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 ZCWPW2Q504Y3 356 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM76AQ8TAV0 307 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 STIM2Q9P246 746 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 AHDC1Q5TGY3 1603 aaPredicted RBP26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 POTEFA5A3E0 1075 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 KRT18P05783 430 aaKnown RBP26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM153BP0C7A2 387 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 POTEIP0CG38 1075 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 TCP1P17987 556 aaKnown RBP26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 CARSP49589 748 aaKnown RBP26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 DOK7Q18PE1 504 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM153CQ494X1 144 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 SLC9C1Q4G0N8 1177 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 POTEGQ6S5H5 508 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 POTEEQ6S8J3 1075 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 SH2D3CQ8N5H7 860 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM153AQ9UHL3 310 aa26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.91■■□□□ 1.9
SPTSSA-201ENST00000298130 PLA2G4BP0C869 781 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 ATP2B4P23634 1241 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 ZFPM1Q8IX07 1006 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 CUL5Q93034 780 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 NFU1Q9UMS0 254 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 TTLL1O95922 423 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 GUCY2FP51841 1108 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 SLC30A10Q6XR72 485 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 CERS5Q8N5B7 392 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 SCFD1Q8WVM8 642 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 PCDHAC2Q9Y5I4 1007 aa26.9■■□□□ 1.9
SPTSSA-201ENST00000298130 SERPINB2P05120 415 aa26.89■■□□□ 1.9
SPTSSA-201ENST00000298130 SMARCA1P28370 1054 aa26.89■■□□□ 1.9
SPTSSA-201ENST00000298130 PSMC6P62333 389 aa26.89■■□□□ 1.9
SPTSSA-201ENST00000298130 GABPAQ06546 454 aa26.89■■□□□ 1.9
SPTSSA-201ENST00000298130 USP40Q9NVE5 1235 aa26.89■■□□□ 1.9
SPTSSA-201ENST00000298130 NFIAQ12857 509 aa26.89■■□□□ 1.89
SPTSSA-201ENST00000298130 GAKO14976 1311 aa26.89■■□□□ 1.89
SPTSSA-201ENST00000298130 MED24O75448 989 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 KRT14P02533 472 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 GUCY2DQ02846 1103 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 ADAM9Q13443 819 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 KIAA0753Q2KHM9 967 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 SERPINB13Q9UIV8 391 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 CDK5RAP2Q96SN8 1893 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 NOVP48745 357 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 NT5C2P49902 561 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 TCP10Q12799 353 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 EPB41L5Q9HCM4 733 aa26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 BMP2KQ9NSY1 1161 aaPredicted RBP26.88■■□□□ 1.89
SPTSSA-201ENST00000298130 SNHG28P0DPA3 235 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 KRT12Q99456 494 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 CEP72Q9P209 647 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 PJA2O43164 708 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 SLC9A1P19634 815 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 SHMT1P34896 483 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 PPP4R3AQ6IN85 833 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 IKZF4Q9H2S9 585 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 EMILIN3Q9NT22 766 aa26.87■■□□□ 1.89
SPTSSA-201ENST00000298130 RPS6KA5O75582 802 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 EPS15P42566 896 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 CLK2P49760 499 aaKnown RBP26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 ATP1A2P50993 1020 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 KLHL30Q0D2K2 578 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 PABPC4Q13310 644 aaKnown RBP eCLIP26.86■■□□□ 1.891e-6■■■■■ 28.5
SPTSSA-201ENST00000298130 COL24A1Q17RW2 1714 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 MRPL12P52815 198 aaKnown RBP26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 TTMPQ5BVD1 217 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms