RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TAB2Q9NYJ8 693 aa23.83■■□□□ 1.4
SOX17-201ENST00000297316 SPDYE16A6NNV3 312 aaPredicted RBP23.82■■□□□ 1.4
SOX17-201ENST00000297316 KCNJ18B7U540 433 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 IRF6O14896 467 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 CHMP2AO43633 222 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 SPATA31C1P0DKV0 1188 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 EIF2AK2P19525 551 aaKnown RBP23.82■■□□□ 1.4
SOX17-201ENST00000297316 IREB2P48200 963 aaKnown RBP23.82■■□□□ 1.4
SOX17-201ENST00000297316 PSMC6P62333 389 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 CYP4A11Q02928 519 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 KCNJ12Q14500 433 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 TCP11X2Q5H9J9 407 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 SH3D19Q5HYK7 790 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 PKD2L1Q9P0L9 805 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 TNNT1P13805 278 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 GHRHRQ02643 423 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 TTI2Q6NXR4 508 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 DDX12PQ92771 950 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 VPS16Q9H269 839 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 KCND1Q9NSA2 647 aa23.82■■□□□ 1.4
SOX17-201ENST00000297316 KDM3AQ9Y4C1 1321 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 SCN4AP35499 1836 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 LRCH2Q5VUJ6 765 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 CEP135Q66GS9 1140 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 RNF207Q6ZRF8 634 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 ZC3H15Q8WU90 426 aaKnown RBP23.81■■□□□ 1.4
SOX17-201ENST00000297316 DUSP9Q99956 384 aaKnown RBP23.81■■□□□ 1.4
SOX17-201ENST00000297316 WDR11Q9BZH6 1224 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 RGL1Q9NZL6 768 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 LRRC10BA6NIK2 292 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 PSMD10O75832 226 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 MRPS9P82933 396 aaKnown RBP23.81■■□□□ 1.4
SOX17-201ENST00000297316 BAATQ14032 418 aaPredicted RBP23.81■■□□□ 1.4
SOX17-201ENST00000297316 PLS1Q14651 629 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 NYAP1Q6ZVC0 841 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 OTOP1Q7RTM1 612 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 CREBRFQ8IUR6 639 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 SLC5A5Q92911 643 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 CTAGE1Q96RT6 745 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 MXRA8Q9BRK3 442 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 NT5C3AQ9H0P0 336 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 SLC39A2Q9NP94 309 aa23.81■■□□□ 1.4
SOX17-201ENST00000297316 PSMA7O14818 248 aa23.8■■□□□ 1.4
SOX17-201ENST00000297316 FDX1P10109 184 aa23.8■■□□□ 1.4
SOX17-201ENST00000297316 COPB1P53618 953 aaKnown RBP23.8■■□□□ 1.4
SOX17-201ENST00000297316 SEMA3FQ13275 785 aa23.8■■□□□ 1.4
SOX17-201ENST00000297316 ZNF577Q9BSK1 485 aa23.8■■□□□ 1.4
SOX17-201ENST00000297316 NPHP3-ACAD11A0A0J9YXS1 232 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 PLA2G4BP0C869 781 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 GADL1Q6ZQY3 521 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 UNC13DQ70J99 1090 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 RBM46Q8TBY0 533 aaKnown RBP23.79■■□□□ 1.4
SOX17-201ENST00000297316 EEF2KMTQ96G04 330 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 TRIM47Q96LD4 638 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 IDEP14735 1019 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 CACNB1Q02641 598 aaPredicted RBP23.79■■□□□ 1.4
SOX17-201ENST00000297316 RAD51AP2Q09MP3 1159 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 STIM1Q13586 685 aa23.79■■□□□ 1.4
SOX17-201ENST00000297316 EIF2AK1Q9BQI3 630 aaKnown RBP23.79■■□□□ 1.4
SOX17-201ENST00000297316 SRRTQ9BXP5 876 aaKnown RBP23.79■■□□□ 1.4
SOX17-201ENST00000297316 RPA1P27694 616 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 NF2P35240 595 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 HAUS3Q68CZ6 603 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 ANKRD40Q6AI12 368 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 CCDC47Q96A33 483 aaKnown RBP23.78■■□□□ 1.4
SOX17-201ENST00000297316 DHTKD1Q96HY7 919 aaPredicted RBP23.78■■□□□ 1.4
SOX17-201ENST00000297316 PPP1R13BQ96KQ4 1090 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 PRIMPOLQ96LW4 560 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 DDX39AO00148 427 aaKnown RBP23.78■■□□□ 1.4
SOX17-201ENST00000297316 N4BP3O15049 544 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 GAS7O60861 476 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 MYCLP12524 364 aaPredicted RBP23.78■■□□□ 1.4
SOX17-201ENST00000297316 KCNJ6P48051 423 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 FILIP1LQ4L180 1135 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 ANKRD13AQ8IZ07 590 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 CCDC112Q8NEF3 446 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 P2RX5Q93086 422 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 DNAJC19Q96DA6 116 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 RMDN3Q96TC7 470 aa23.78■■□□□ 1.4
SOX17-201ENST00000297316 GRIN3BO60391 1043 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 CCNE1P24864 410 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 SPAG1Q07617 926 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 RBL2Q08999 1139 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 PGM5Q15124 567 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 CNNM4Q6P4Q7 775 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 GLIS3Q8NEA6 775 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 MYRIPQ8NFW9 859 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 ERMNQ8TAM6 284 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 KCNH7Q9NS40 1196 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 HOXC10Q9NYD6 342 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 PVALEFA0A1B0GWK0 134 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 IPO5O00410 1097 aaKnown RBP23.77■■□□□ 1.4
SOX17-201ENST00000297316 TRAF5O00463 557 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 PABPC4Q13310 644 aaKnown RBP eCLIP23.77■■□□□ 1.4
SOX17-201ENST00000297316 CTTNQ14247 550 aaKnown RBP23.77■■□□□ 1.4
SOX17-201ENST00000297316 TEX13BQ9BXU2 312 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 SEMA6BQ9H3T3 888 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 UNC45AQ9H3U1 944 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 CLEC11AQ9Y240 323 aa23.77■■□□□ 1.4
SOX17-201ENST00000297316 EHHADHQ08426 723 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms