RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
GDF9-201ENST00000296875 MYO6Q9UM54 1294 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 KIAA1024Q9UPX6 916 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 FZD9O00144 591 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 NDUFB10O96000 172 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 SSBP05455 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
GDF9-201ENST00000296875 CYP3A4P08684 503 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 ARHGAP25P42331 645 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 STAT2P52630 851 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 GPBP1Q86WP2 473 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 CHURC1Q8WUH1 139 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 SYN2Q92777 582 aaPredicted RBP16.13■□□□□ 0.17
GDF9-201ENST00000296875 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.17
GDF9-201ENST00000296875 FAM53CQ9NYF3 392 aa16.13■□□□□ 0.17
GDF9-201ENST00000296875 USP17L15C9J2P7 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L13C9JLJ4 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L11C9JVI0 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L18D6R9N7 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L22D6RA61 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L17D6RBQ6 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L19D6RCP7 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L20D6RJB6 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 MEIS2O14770 477 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 FANCGO15287 622 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 MUTP22033 750 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 RPA1P27694 616 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 ZNF76P36508 570 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 EPS15P42566 896 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 MARSP56192 900 aaKnown RBP16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L24Q0WX57 530 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 GPR162Q16538 588 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 FKBP1CQ5VVH2 108 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 CCDC70Q6NSX1 233 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 USP17L6PQ6QN14 398 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 CACNA2D4Q7Z3S7 1137 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 HNRNPLLQ8WVV9 542 aaKnown RBP16.12■□□□□ 0.17
GDF9-201ENST00000296875 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 DNAJC19Q96DA6 116 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 CHP1Q99653 195 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
GDF9-201ENST00000296875 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
GDF9-201ENST00000296875 SIPA1L1O43166 1804 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 TRAF5O00463 557 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 EDIL3O43854 480 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 PLA2G6O60733 806 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 VAV2P52735 878 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
GDF9-201ENST00000296875 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 ALS2CR12Q96Q35 445 aa16.11■□□□□ 0.17
GDF9-201ENST00000296875 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 CETN3O15182 167 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 GH2P01242 217 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 CACNB3P54284 484 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 PRR16Q569H4 304 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 WDR59Q6PJI9 974 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SH3BP5LQ7L8J4 393 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 AGBL3Q8NEM8 1001 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 FAM151AQ8WW52 585 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 CRYGNQ8WXF5 182 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 POLR3CQ9BUI4 534 aaPredicted RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 ACBD3Q9H3P7 528 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SIK3Q9Y2K2 1263 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SAR1BQ9Y6B6 198 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SSU72P8A0A1W2PR75 194 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 RNF225M0QZC1 329 aaPredicted RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 TACC1O75410 805 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 ZRANB2O95218 330 aaKnown RBP eCLIP16.1■□□□□ 0.17
GDF9-201ENST00000296875 GAP43P17677 238 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 RPL13P26373 211 aaKnown RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 DLGAP5Q15398 846 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 ZCWPW2Q504Y3 356 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 LRRN4CLQ8ND94 238 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 IRX2Q9BZI1 471 aaPredicted RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 AGPAT5Q9NUQ2 364 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 CEP72Q9P209 647 aa16.1■□□□□ 0.17
GDF9-201ENST00000296875 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
GDF9-201ENST00000296875 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
GDF9-201ENST00000296875 GDF11O95390 407 aa16.09■□□□□ 0.17
GDF9-201ENST00000296875 PNMA6AP0CW24 399 aaPredicted RBP16.09■□□□□ 0.17
GDF9-201ENST00000296875 CYP11B2P19099 503 aa16.09■□□□□ 0.17
GDF9-201ENST00000296875 LMNB1P20700 586 aa16.09■□□□□ 0.17
GDF9-201ENST00000296875 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
GDF9-201ENST00000296875 CC2D1AQ6P1N0 951 aaPredicted RBP16.09■□□□□ 0.17
GDF9-201ENST00000296875 MSL3Q8N5Y2 521 aaKnown RBP16.09■□□□□ 0.17
GDF9-201ENST00000296875 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms