RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ATP8A1Q9Y2Q0 1164 aa14.63□□□□□ -0.07
TNFRSF21-201ENST00000296861 TNNC1P63316 161 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 ZNF211Q13398 564 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 CCDC121Q6ZUS5 278 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 SPATA31A1Q5TZJ5 1347 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 HAUS3Q68CZ6 603 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 CELF4Q9BZC1 486 aaKnown RBP14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 AMACRQ9UHK6 382 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 ZBTB21Q9ULJ3 1066 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 NOVA2Q9UNW9 492 aaKnown RBP14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 COL4A3BPQ9Y5P4 624 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 GOLGA8KD6RF30 607 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 CETN3O15182 167 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 LRRN2O75325 713 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 GCNT3O95395 438 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 SLC9A1P19634 815 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 NBPF9Q3BBW0 867 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 MIIPQ5JXC2 388 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 POTEGQ6S5H5 508 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 TEX2Q8IWB9 1127 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 RETREG2Q8NC44 543 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 DYDC1Q8WWB3 177 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 FGFBP2Q9BYJ0 223 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 CCSER1Q9C0I3 900 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 PLAGL2Q9UPG8 496 aa14.62□□□□□ -0.07
TNFRSF21-201ENST00000296861 GCOM1H8Y6P7 765 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 ORC4O43929 436 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 MYZAPP0CAP1 466 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 PDE6BP35913 854 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 FKBP3Q00688 224 aaKnown RBP14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 CEP89Q96ST8 783 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 MXD3Q9BW11 206 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 RAD51CO43502 376 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 GFPT2O94808 682 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 KCNB1Q14721 858 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 GRM4Q14833 912 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 TTMPQ5BVD1 217 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 CCDC65Q8IXS2 484 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 C4orf32Q8N8J7 132 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 KCNG1Q9UIX4 513 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 MYH2Q9UKX2 1941 aa14.61□□□□□ -0.07
TNFRSF21-201ENST00000296861 ANO9A1A5B4 782 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 RASSF10A6NK89 507 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 SLC35G1Q2M3R5 365 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 BCL9O00512 1426 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 DDX39AO00148 427 aaKnown RBP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 EIF3HO15372 352 aaKnown RBP eCLIP14.6□□□□□ -0.076e-7■■□□□ 13.2
TNFRSF21-201ENST00000296861 CYP2J2P51589 502 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 RCAN1P53805 252 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 COASYQ13057 564 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 GRB10Q13322 594 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 ZYXQ15942 572 aaKnown RBP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 DOK7Q18PE1 504 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 ANKRD2Q9GZV1 360 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 IKZF4Q9H2S9 585 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 DAPK3O43293 454 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 RASA1P20936 1047 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 HDLBPQ00341 1268 aaKnown RBP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 DHX9Q08211 1270 aaKnown RBP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 SF3B2Q13435 895 aaKnown RBP14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 TBC1D31Q96DN5 1066 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 SH2D3AQ9BRG2 576 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 PSTPIP2Q9H939 334 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 MLXIPLQ9NP71 852 aa14.6□□□□□ -0.07
TNFRSF21-201ENST00000296861 SSR1P43307 286 aaKnown RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 VPS41P49754 854 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 UNC13DQ70J99 1090 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 ZNF804AQ7Z570 1209 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 PHLDB2Q86SQ0 1253 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 GIMAP7Q8NHV1 300 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 MRRFQ96E11 262 aaKnown RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 COL18A1P39060 1754 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 USP17L10C9JJH3 530 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 TBCAO75347 108 aaKnown RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 PDXDC1Q6P996 788 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 VPS36Q86VN1 386 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 PIGOQ8TEQ8 1089 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 CTNNBL1Q8WYA6 563 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 VIPAS39Q9H9C1 493 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 EMILIN3Q9NT22 766 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 ARFGEF2Q9Y6D5 1785 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 VIMP08670 466 aaKnown RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 RPSAP08865 295 aaKnown RBP14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 GUCY2CP25092 1073 aa14.59□□□□□ -0.07
TNFRSF21-201ENST00000296861 HOXA13P31271 388 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms