RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 PALMO75781 387 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 DEUP1Q05D60 604 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 NR1H3Q13133 447 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 CYP4A11Q02928 519 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 CALR3Q96L12 384 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 CEP72Q9P209 647 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 MLH3Q9UHC1 1453 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 PHEXP78562 749 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 DYNC1I2Q13409 638 aaKnown RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 JDP2Q8WYK2 163 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 SPDL1Q96EA4 605 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 GREM2Q9H772 168 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 ATP10AO60312 1499 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 CDC25AP30304 524 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 CHRNDQ07001 517 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 JADE1Q6IE81 842 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 OSBPL9Q96SU4 736 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 SERPINI1Q99574 410 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 PICK1Q9NRD5 415 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 KLC4Q9NSK0 619 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 MX2P20592 715 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 MAGOHP61326 146 aaKnown RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 MFSD14BQ5SR56 506 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 ATG16L1Q676U5 607 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 PSD3Q9NYI0 1048 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 TTLL3Q9Y4R7 772 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 SYNGAP1Q96PV0 1343 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 CREB3O43889 395 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 GSTA1P08263 222 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 GSTA2P09210 222 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 RWDD2BP57060 319 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 BEND6Q5SZJ8 279 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 TAB3Q8N5C8 712 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 ABTB1Q969K4 478 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 EPC1Q9H2F5 836 aa11.92□□□□□ -0.5
PBRM1-201ENST00000296302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.57e-7■■■■□ 21.4
PBRM1-201ENST00000296302 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
PBRM1-201ENST00000296302 MAP3K15Q6ZN16 1313 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CCZ1BP86790 482 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CCZ1P86791 482 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 GNPTABQ3T906 1256 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 NME8Q8N427 588 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 TMEM206Q9H813 350 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 GDAQ9Y2T3 454 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 RPAP1Q9BWH6 1393 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 LRRN2O75325 713 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 ACTN3Q08043 901 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 TAF12Q16514 161 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 POMGNT1Q8WZA1 660 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 PPWD1Q96BP3 646 aaKnown RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 ACCSQ96QU6 501 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 AMNQ9BXJ7 453 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 XAB2Q9HCS7 855 aaKnown RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 HESX1Q9UBX0 185 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 IQANK1A0A1B0GTG1 560 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 MCF2LO15068 1137 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CPP00450 1065 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CENPUQ71F23 418 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 PROM2Q8N271 834 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 RIOK1Q9BRS2 568 aaKnown RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 BAG5Q9UL15 447 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 PNMA2Q9UL42 364 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 SCINQ9Y6U3 715 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 SPAG7O75391 227 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 ACSL3O95573 720 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 STX1BP61266 288 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CUL4BQ13620 913 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 E4F1Q66K89 784 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 ARMC2Q8NEN0 867 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 CHMP6Q96FZ7 201 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 WDR24Q96S15 920 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
PBRM1-201ENST00000296302 SH3GLB2Q9NR46 395 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
PBRM1-201ENST00000296302 KRT1P04264 644 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 CHGBP05060 677 aa11.9□□□□□ -0.5
PBRM1-201ENST00000296302 VSNL1P62760 191 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms