RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 KIAA1328Q86T90 577 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 MLXIPQ9HAP2 919 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
RHO-201ENST00000296271 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 TBC1D8O95759 1140 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 RXRBP28702 533 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 GOLGA1Q92805 767 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 JAKMIP2Q96AA8 810 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 MYH10P35580 1976 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 SPDYE3A6NKU9 549 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 HOXD13P35453 343 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 USP11P51784 963 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 MRPS25P82663 173 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 KRT222Q8N1A0 295 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 GMCL1Q96IK5 515 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 WDR18Q9BV38 432 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
RHO-201ENST00000296271 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
RHO-201ENST00000296271 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
RHO-201ENST00000296271 EGFRP00533 1210 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 MYBP10242 640 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 CYP3A7P24462 503 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 ARID5AQ03989 594 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 COBLL1Q53SF7 1204 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 HYIQ5T013 277 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 DEFB132Q7Z7B7 95 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 PSMB7Q99436 277 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 PCNTO95613 3336 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
RHO-201ENST00000296271 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
RHO-201ENST00000296271 BAP1Q92560 729 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 KCTD10Q9H3F6 313 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 SMARCAL1Q9NZC9 954 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 PKD2L1Q9P0L9 805 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 CAPN6Q9Y6Q1 641 aa13.05□□□□□ -0.32
RHO-201ENST00000296271 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 C10orf71Q711Q0 1435 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 NOL4O94818 638 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 DPEP1P16444 411 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 SREBF1P36956 1147 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 GIT2Q14161 759 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 RSBN1LQ6PCB5 846 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 TLR2O60603 784 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 ENTPD3O75355 529 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 ZMYND10O75800 440 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 ACTN1P12814 892 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 KCNA3P22001 575 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 ZNF76P36508 570 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 GYS2P54840 703 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 LRRC63Q05C16 580 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 ZNHIT6Q9NWK9 470 aaKnown RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 EHD2Q9NZN4 543 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 RGS17Q9UGC6 210 aaPredicted RBP13.04□□□□□ -0.32
RHO-201ENST00000296271 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
RHO-201ENST00000296271 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms