RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 ADCK5Q3MIX3 580 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 NELFBQ8WX92 580 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 MRRFQ96E11 262 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 SAAL1Q96ER3 474 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 DNM3Q9UQ16 869 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 CCL15Q16663 113 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 PHLDB2Q86SQ0 1253 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC197Q8NCU1 140 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 PLCB1Q9NQ66 1216 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 GINS2Q9Y248 185 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 RASSF2P50749 326 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 ACTN3Q08043 901 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 PDE1CQ14123 709 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 EXOC8Q8IYI6 725 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 RAB3IPQ96QF0 476 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 MTA3Q9BTC8 594 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 ERCC3P19447 782 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 CASP14P31944 242 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 RNF26Q9BY78 433 aaPredicted RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 PCDHA5Q9Y5H7 936 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 MYOM1P52179 1685 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 FLT1P17948 1338 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 FCER1AP12319 257 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 IL1R1P14778 569 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 POLE2P56282 527 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC110Q8TBZ0 833 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 MXD3Q9BW11 206 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 SUFUQ9UMX1 484 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 PFKFB2O60825 505 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 CYP21A2P08686 494 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 EEF2P13639 858 aaKnown RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 STX2P32856 288 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 ACTR5Q9H9F9 607 aaPredicted RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 HOMER3Q9NSC5 361 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 USH1CQ9Y6N9 552 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 GPR75-ASB3A0A0A6YYF3 556 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 PNMA6FA0A0J9YX94 578 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 SLC16A2P36021 539 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 LRRC23Q53EV4 343 aaPredicted RBP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 PHLDB3Q6NSJ2 640 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 ZDHHC15Q96MV8 337 aa12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.42□□□□□ -0.42
NPC1L1-201ENST00000289547 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC169A6NNP5 214 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 CYP2D6P10635 497 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 PPP1R2P41236 205 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 HMGCS2P54868 508 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 PRR16Q569H4 304 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 CEP120Q8N960 986 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 MMP19Q99542 508 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 IKBKBO14920 756 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 LIFRP42702 1097 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 NNTQ13423 1086 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 SNX29Q8TEQ0 813 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 BLZF1Q9H2G9 400 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 ABCB11O95342 1321 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 WDR46O15213 610 aaKnown RBP12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 EPHB4P54760 987 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 PDCLQ13371 301 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 SUDS3Q9H7L9 328 aaPredicted RBP12.41□□□□□ -0.42
NPC1L1-201ENST00000289547 A0A1W2PQ27 194 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 A0A1W2PQ64 194 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 A0A1W2PQD8 194 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 hCG_1642624A0A1W2PR95 340 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 IFNAR2P48551 515 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 DBN1Q16643 649 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 OPHN1O60890 802 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 TAF11Q15544 211 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms