RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SP4Q02446 784 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
TPM1-202ENST00000288398 RNF20Q5VTR2 975 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 SERINC5Q86VE9 423 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
TPM1-202ENST00000288398 CDHR1Q96JP9 859 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 INPP4AQ96PE3 977 aaPredicted RBP16.16■□□□□ 0.18
TPM1-202ENST00000288398 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 EHMT1Q9H9B1 1298 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 FRMPD4Q14CM0 1322 aa16.16■□□□□ 0.18
TPM1-202ENST00000288398 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 CAND2O75155 1236 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 GJB5O95377 273 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 POU3F3P20264 500 aaPredicted RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 MRPS9P82933 396 aaKnown RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 TRIM71Q2Q1W2 868 aaKnown RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 TMCO2Q7Z6W1 182 aaPredicted RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 SEPT8Q92599 483 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 MTUS1Q9ULD2 1270 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 COG5Q9UP83 839 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
TPM1-202ENST00000288398 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
TPM1-202ENST00000288398 TTC28Q96AY4 2481 aa16.14■□□□□ 0.18
TPM1-202ENST00000288398 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
TPM1-202ENST00000288398 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
TPM1-202ENST00000288398 GRB10Q13322 594 aa16.14■□□□□ 0.17
TPM1-202ENST00000288398 GPR20Q99678 358 aa16.14■□□□□ 0.17
TPM1-202ENST00000288398 INSL6Q9Y581 213 aa16.14■□□□□ 0.17
TPM1-202ENST00000288398 VCANP13611 3396 aa16.14■□□□□ 0.17
TPM1-202ENST00000288398 BAZ2BQ9UIF8 2168 aaKnown RBP16.13■□□□□ 0.17
TPM1-202ENST00000288398 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 SLC27A2O14975 620 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 TREHO43280 583 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 PLEKHA8P1O95397 391 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 CTSHP09668 335 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 RXRAP19793 462 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 LIFRP42702 1097 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 ARHGAP4P98171 946 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 GPNMBQ14956 572 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 DBF4BQ8NFT6 615 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 WNT8BQ93098 351 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 HLA-CQ95604 372 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 SENP7Q9BQF6 1050 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 CHD7Q9P2D1 2997 aa16.13■□□□□ 0.17
TPM1-202ENST00000288398 EPOPA6NHQ4 379 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 TFF2Q03403 129 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 RSPH3Q86UC2 560 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
TPM1-202ENST00000288398 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 SRBD1Q8N5C6 995 aaKnown RBP16.12■□□□□ 0.17
TPM1-202ENST00000288398 GDPD5Q8WTR4 605 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 GPRASP2Q96D09 838 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
TPM1-202ENST00000288398 RNPEPQ9H4A4 650 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 LMCD1Q9NZU5 365 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 TET1Q8NFU7 2136 aa16.12■□□□□ 0.17
TPM1-202ENST00000288398 LINC01553A4QN01 128 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 MEIS2O14770 477 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 ARHGEF15O94989 841 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 TCF7P36402 384 aaPredicted RBP16.11■□□□□ 0.17
TPM1-202ENST00000288398 MTMR1Q13613 665 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 MBTPS1Q14703 1052 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 KRT40Q6A162 431 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 TRAF7Q6Q0C0 670 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 APBB2Q92870 758 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 GLG1Q92896 1179 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 YME1L1Q96TA2 773 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 BCAS3Q9H6U6 928 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 NRCAMQ92823 1304 aa16.11■□□□□ 0.17
TPM1-202ENST00000288398 ERVK-21P61565 698 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 HIC1Q14526 733 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 UBE2SQ16763 222 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 PLEKHG4Q58EX7 1191 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPM1-202ENST00000288398 FBXO22Q8NEZ5 403 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 SEPT1Q8WYJ6 367 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
TPM1-202ENST00000288398 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
TPM1-202ENST00000288398 ERAP1Q9NZ08 941 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
TPM1-202ENST00000288398 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms