RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TBX21Q9UL17 535 aa28.67■■■□□ 2.18
PDF-201ENST00000288022 PCDHA4Q9UN74 947 aa28.67■■■□□ 2.18
PDF-201ENST00000288022 SCN10AQ9Y5Y9 1956 aa28.67■■■□□ 2.18
PDF-201ENST00000288022 ATP9AO75110 1047 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 KCNA2P16389 499 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 BMP8BP34820 402 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 NFRKBQ6P4R8 1299 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 WASF1Q92558 559 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 KAT2BQ92831 832 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 ALG1Q9BT22 464 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 KCNH7Q9NS40 1196 aa28.66■■■□□ 2.18
PDF-201ENST00000288022 HOXD8P13378 290 aaPredicted RBP28.65■■■□□ 2.18
PDF-201ENST00000288022 ITGB8P26012 769 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 PSEN2P49810 448 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 MFSD10Q14728 455 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 RABEP1Q15276 862 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 BLIDQ8IZY5 108 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 FAM177A1Q8N128 213 aaPredicted RBP28.65■■■□□ 2.18
PDF-201ENST00000288022 PPP1R12CQ9BZL4 782 aa28.65■■■□□ 2.18
PDF-201ENST00000288022 TRMT13Q9NUP7 481 aaKnown RBP28.65■■■□□ 2.18
PDF-201ENST00000288022 F2P00734 622 aa28.64■■■□□ 2.18
PDF-201ENST00000288022 SUPT20HL2P0C7V6 817 aa28.64■■■□□ 2.18
PDF-201ENST00000288022 PTPN11Q06124 597 aaPredicted RBP28.64■■■□□ 2.18
PDF-201ENST00000288022 GPR20Q99678 358 aa28.64■■■□□ 2.18
PDF-201ENST00000288022 KCNJ14Q9UNX9 436 aa28.64■■■□□ 2.18
PDF-201ENST00000288022 TIMP1P01033 207 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 CYP3A4P08684 503 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 ARP10275 920 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 KIAA0753Q2KHM9 967 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 GALNT17Q6IS24 598 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 PLA2G4DQ86XP0 818 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 C7orf31Q8N865 590 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 NSUN7Q8NE18 718 aaKnown RBP28.63■■■□□ 2.17
PDF-201ENST00000288022 NOD1Q9Y239 953 aa28.63■■■□□ 2.17
PDF-201ENST00000288022 MEIS1O00470 390 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 LGALS2P05162 132 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 UTP14CQ5TAP6 766 aaKnown RBP28.62■■■□□ 2.17
PDF-201ENST00000288022 NIPA1Q7RTP0 329 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 CCDC83Q8IWF9 413 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 DAGLBQ8NCG7 672 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 CRYGNQ8WXF5 182 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 ZSCAN31Q96LW9 406 aaPredicted RBP28.62■■■□□ 2.17
PDF-201ENST00000288022 SDF4Q9BRK5 362 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 HIPK3Q9H422 1215 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 TELO2Q9Y4R8 837 aa28.62■■■□□ 2.17
PDF-201ENST00000288022 FAM86B1E9PN63 330 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 JAK2O60674 1132 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 FAM86B2P0C5J1 330 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 C16orf70Q9BSU1 422 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 PHF20Q9BVI0 1012 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 AGO4Q9HCK5 861 aaKnown RBP28.61■■■□□ 2.17
PDF-201ENST00000288022 JPH1Q9HDC5 661 aaPredicted RBP28.61■■■□□ 2.17
PDF-201ENST00000288022 GJB4Q9NTQ9 266 aa28.61■■■□□ 2.17
PDF-201ENST00000288022 A0A1W2PPC1 479 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 H3BRB1 525 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 HAS3O00219 553 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 CYP2C9P11712 490 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 FDPSP14324 419 aaKnown RBP28.6■■■□□ 2.17
PDF-201ENST00000288022 FPGSQ05932 587 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 TUT1Q9H6E5 874 aaKnown RBP28.6■■■□□ 2.17
PDF-201ENST00000288022 HDAC6Q9UBN7 1215 aa28.6■■■□□ 2.17
PDF-201ENST00000288022 ST18O60284 1047 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 CYP2C18P33260 490 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 TCF7P36402 384 aaPredicted RBP28.59■■■□□ 2.17
PDF-201ENST00000288022 ST3GAL1Q11201 340 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 SESTD1Q86VW0 696 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 TDHQ8IZJ6 230 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 TBCKQ8TEA7 893 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 SEPT1Q8WYJ6 367 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 TBC1D32Q96NH3 1257 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 SH2B1Q9NRF2 756 aaPredicted RBP28.59■■■□□ 2.17
PDF-201ENST00000288022 SLC9A2Q9UBY0 812 aa28.59■■■□□ 2.17
PDF-201ENST00000288022 IGLV3-22A0A075B6J6 115 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 SETQ01105 290 aaPredicted RBP28.58■■■□□ 2.17
PDF-201ENST00000288022 NPY5RQ15761 445 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 PTGISQ16647 500 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 PRR16Q569H4 304 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 GDF6Q6KF10 455 aaPredicted RBP28.58■■■□□ 2.17
PDF-201ENST00000288022 MFSD5Q6N075 450 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 TRIM50Q86XT4 487 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 TMEM199Q8N511 208 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 UIMC1Q96RL1 719 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 NOC4LQ9BVI4 516 aaKnown RBP28.58■■■□□ 2.17
PDF-201ENST00000288022 GTF2IRD1Q9UHL9 959 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 ZNF215Q9UL58 517 aaPredicted RBP28.58■■■□□ 2.17
PDF-201ENST00000288022 NFASCO94856 1347 aa28.58■■■□□ 2.17
PDF-201ENST00000288022 FOSBP53539 338 aa28.57■■■□□ 2.16
PDF-201ENST00000288022 ITGB3BPQ13352 177 aaPredicted RBP28.57■■■□□ 2.16
PDF-201ENST00000288022 KRT25Q7Z3Z0 450 aa28.57■■■□□ 2.16
PDF-201ENST00000288022 GSTTP1A0A1W2PQM5 241 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 M0R2N6 131 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 DDX39AO00148 427 aaKnown RBP28.56■■■□□ 2.16
PDF-201ENST00000288022 CIITAP33076 1130 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 USP11P51784 963 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 NONOQ15233 471 aaKnown RBP eCLIP28.56■■■□□ 2.16
PDF-201ENST00000288022 UMODL1Q5DID0 1318 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 ZNF577Q9BSK1 485 aa28.56■■■□□ 2.16
PDF-201ENST00000288022 CCDC194A0A1B0GVG4 234 aa28.55■■■□□ 2.16
PDF-201ENST00000288022 IPO5O00410 1097 aaKnown RBP28.55■■■□□ 2.16
PDF-201ENST00000288022 CCL23P55773 120 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms