RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TUBB8Q3ZCM7 444 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 SLFNL1Q499Z3 407 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 CCDC68Q9H2F9 335 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 RPF1Q9H9Y2 349 aaKnown RBP20.16■□□□□ 0.82
PCDH1-201ENST00000287008 TBC1D22BQ9NU19 505 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 WDR64B1ANS9 1081 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 MESDQ14696 234 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 AFAP1L1Q8TED9 768 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 CPVLQ9H3G5 476 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 I3L4J1 428 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 DPCR1Q3MIW9 517 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 RINT1Q6NUQ1 792 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 GRAMD1CQ8IYS0 662 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 PPP2R2CQ9Y2T4 447 aa20.16■□□□□ 0.82
PCDH1-201ENST00000287008 H7C0C1 242 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 HOXD10P28358 340 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ELF1P32519 619 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ATP5OP48047 213 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ETF1P62495 437 aaKnown RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 MARCH10Q8NA82 808 aaPredicted RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 UBN2Q6ZU65 1347 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 A0A0G2JLW4 131 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L15C9J2P7 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L13C9JLJ4 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L11C9JVI0 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L18D6R9N7 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L22D6RA61 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L17D6RBQ6 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L19D6RCP7 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L20D6RJB6 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 IKBKBO14920 756 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 COBLO75128 1261 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 DDIT3P35638 169 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ARPP19P56211 112 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L24Q0WX57 530 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 USP17L6PQ6QN14 398 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ENAHQ8N8S7 591 aaPredicted RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 SEPT10Q9P0V9 454 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ZNF233A6NK53 670 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 NDUFAB1O14561 156 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 CASP14P31944 242 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 TPD52P55327 224 aaPredicted RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 PEX3P56589 373 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ELF2Q15723 593 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 SPATA24Q86W54 205 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 KRT76Q01546 638 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 NEDD9Q14511 834 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 PLCB4Q15147 1175 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 PFKFB3Q16875 520 aaPredicted RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 SDCCAG8Q86SQ7 713 aaPredicted RBP20.15■□□□□ 0.82
PCDH1-201ENST00000287008 ZNF653Q96CK0 615 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 SLC12A6Q9UHW9 1150 aa20.15■□□□□ 0.82
PCDH1-201ENST00000287008 GOLGA8SH3BPF8 625 aa20.14■□□□□ 0.82
PCDH1-201ENST00000287008 XPAP23025 273 aaPredicted RBP20.14■□□□□ 0.82
PCDH1-201ENST00000287008 ARMCX2Q7L311 632 aa20.14■□□□□ 0.82
PCDH1-201ENST00000287008 TBC1D16Q8TBP0 767 aa20.14■□□□□ 0.82
PCDH1-201ENST00000287008 EPSTI1Q96J88 318 aa20.14■□□□□ 0.82
PCDH1-201ENST00000287008 PLEKHA4Q9H4M7 779 aa20.14■□□□□ 0.82
PCDH1-201ENST00000287008 ABCB11O95342 1321 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 LARGE1O95461 756 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 MYL3P08590 195 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 PHBP35232 272 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
PCDH1-201ENST00000287008 RCAN1P53805 252 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 PPFIA1Q13136 1202 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 NEDD1Q8NHV4 660 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 MSTO1Q9BUK6 570 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 GLI2P10070 1586 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 MED7O43513 233 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 C4orf50Q6ZRC1 276 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 PLCB1Q9NQ66 1216 aa20.14■□□□□ 0.81
PCDH1-201ENST00000287008 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
PCDH1-201ENST00000287008 KAZNQ674X7 775 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 ADAT2Q7Z6V5 191 aaKnown RBP20.13■□□□□ 0.81
PCDH1-201ENST00000287008 FAM20AQ96MK3 541 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 STAT3P40763 770 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 ARHGAP4P98171 946 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 STRIP1Q5VSL9 837 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 THNSL1Q8IYQ7 743 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 ZBED2Q9BTP6 218 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 EHHADHQ08426 723 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 RESTQ13127 1097 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 GCNT4Q9P109 453 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 NEDD4P46934 1319 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 CSPG5O95196 566 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 TTLL4Q14679 1199 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 MAPK6Q16659 721 aa20.13■□□□□ 0.81
PCDH1-201ENST00000287008 CD2BP2O95400 341 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 LDHAP00338 332 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 FOXO4P98177 505 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 RASSF7Q02833 373 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 DSTYKQ6XUX3 929 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 SMIM5Q71RC9 77 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 FASTKD5Q7L8L6 764 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 TOPORSQ9NS56 1045 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms