RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PTGISQ16647 500 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC121Q6ZUS5 278 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TSEN2Q8NCE0 465 aaKnown RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 ZIM3Q96PE6 472 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CCT8L2Q96SF2 557 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CABP5Q9NP86 173 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CDK5RAP2Q96SN8 1893 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 hCG_1642624A0A1W2PR95 340 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 IFT88Q13099 833 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 MEA1Q16626 185 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 KCTD16Q68DU8 428 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 WDR59Q6PJI9 974 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 NLRP14Q86W24 1093 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CEP57Q86XR8 500 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 ZNF444Q8N0Y2 327 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 MYCBPAPQ8TBZ2 947 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 HDAC7Q8WUI4 952 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 FERMT2Q96AC1 680 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC114Q96M63 670 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
ERCC3-201ENST00000285398 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 SERPINB13Q9UIV8 391 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
ERCC3-201ENST00000285398 ERICH2A1L162 156 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 H7C1D1 291 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 MPHOSPH10O00566 681 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 SOCS7O14512 581 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 FGRP09769 529 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 AKR1B1P15121 316 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 NR1D1P20393 614 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 SLC8A1P32418 973 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 GLE1Q53GS7 698 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 MACROD2A1Z1Q3 448 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 TACC1O75410 805 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 NEBLO76041 1014 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 GDF11O95390 407 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 BMP15O95972 392 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 KRT14P02533 472 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 MDH1P40925 334 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 SEC23AQ15436 765 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 IFIT1BQ5T764 474 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 C1orf131Q8NDD1 294 aaKnown RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 NELFBQ8WX92 580 aa11.59□□□□□ -0.55
ERCC3-201ENST00000285398 TRIM6Q9C030 488 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-201ENST00000285398 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 ORC4O43929 436 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 USO1O60763 962 aaKnown RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 COBLO75128 1261 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 RCAN1P53805 252 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 ATP2B2Q01814 1243 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 IFFO1Q0D2I5 559 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 CYB5D1Q6P9G0 228 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 IFT20Q8IY31 132 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 C3orf20Q8ND61 904 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 PYM1Q9BRP8 204 aaKnown RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 MRIQ9BWK5 157 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 RBM28Q9NW13 759 aaKnown RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 SHMT1P34896 483 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 PAFAH1B1P43034 410 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 JAG1P78504 1218 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 SLC7A5Q01650 507 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 C8orf74Q6P047 294 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 CD302Q8IX05 232 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 IQCKQ8N0W5 287 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 SGSM3Q96HU1 749 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 NHEJ1Q9H9Q4 299 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 DDX20Q9UHI6 824 aaKnown RBP11.58□□□□□ -0.56
ERCC3-201ENST00000285398 NAV1Q8NEY1 1877 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 PSME4Q14997 1843 aa11.58□□□□□ -0.56
ERCC3-201ENST00000285398 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 PES1O00541 588 aaKnown RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 RAD21O60216 631 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CLNS1AP54105 237 aaKnown RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 GABPAQ06546 454 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms