RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TGFB3P10600 412 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 KCNA2P16389 499 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 RGS2P41220 211 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 KRT79Q5XKE5 535 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 B3GNT9Q6UX72 402 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 PDILTQ8N807 584 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 TRIM47Q96LD4 638 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 PYM1Q9BRP8 204 aaKnown RBP21.27■■□□□ 1
PDLIM3-202ENST00000284770 ARHGAP39Q9C0H5 1083 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 SAGE1Q9NXZ1 904 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 CCDC39Q9UFE4 941 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 PLXNA1Q9UIW2 1896 aa21.27■■□□□ 1
PDLIM3-202ENST00000284770 LRRC37A2A6NM11 1700 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 A0A087X0B3 334 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 LETM1O95202 739 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 KIF22Q14807 665 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 TIGD1Q96MW7 591 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 STK24Q9Y6E0 443 aa21.26■□□□□ 0.99
PDLIM3-202ENST00000284770 KARSQ15046 597 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 RBM43Q6ZSC3 357 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 GAS2L3Q86XJ1 694 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 ERMNQ8TAM6 284 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 SENP7Q9BQF6 1050 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 SDF4Q9BRK5 362 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 TINF2Q9BSI4 451 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 UNC45AQ9H3U1 944 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 DISC1Q9NRI5 854 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 NFASCO94856 1347 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 SYNGAP1Q96PV0 1343 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 SP2Q02086 613 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 CAMK4Q16566 473 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 LONRF3Q496Y0 759 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 KCNV1Q6PIU1 500 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 LRSAM1Q6UWE0 723 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 FBXO16Q8IX29 292 aaPredicted RBP21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 IQUBQ8NA54 791 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 RASSF8Q8NHQ8 419 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 SNX29Q8TEQ0 813 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 APBA2Q99767 749 aa21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.25■□□□□ 0.99
PDLIM3-202ENST00000284770 DDX39AO00148 427 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 GPR25O00155 361 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 EML1O00423 815 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 SLC26A4O43511 780 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 CHMP2AO43633 222 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 SNAI1O95863 264 aaPredicted RBP21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 CYP2B6P20813 491 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 E2F4Q16254 413 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 HAUS3Q68CZ6 603 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 CALML4Q96GE6 196 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 TNMDQ9H2S6 317 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 VTA1Q9NP79 307 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 USP25Q9UHP3 1055 aa21.24■□□□□ 0.99
PDLIM3-202ENST00000284770 DOCK3Q8IZD9 2030 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 FSD2A1L4K1 749 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 KRT76Q01546 638 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 MAP2K1Q02750 393 aaPredicted RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 ZRSR1Q15695 479 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 RRAGBQ5VZM2 374 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 KRBA2Q6ZNG9 492 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 GIMAP8Q8ND71 665 aaPredicted RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 DHX58Q96C10 678 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 MGAMO43451 1857 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 ACTN4O43707 911 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 CCT6AP40227 531 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 HYIQ5T013 277 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 OLFML2BQ68BL8 750 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 CNNM3Q8NE01 707 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 KATNBL1Q9H079 304 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 TCEAL9Q9UHQ7 104 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 SERTAD1Q9UHV2 236 aa21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 DDX41Q9UJV9 622 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-202ENST00000284770 KIAA1217Q5T5P2 1943 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 KDM3AQ9Y4C1 1321 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 SLFN14P0C7P3 912 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 UBA1P22314 1058 aaKnown RBP21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 RPA1P27694 616 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 GRB10Q13322 594 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 NEDD9Q14511 834 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 EPHA7Q15375 998 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 ZNF746Q6NUN9 644 aaPredicted RBP21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 TAPT1Q6NXT6 567 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 SCFD2Q8WU76 684 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 CDK5RAP3Q96JB5 506 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 HSD17B14Q9BPX1 270 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 EIF2AK1Q9BQI3 630 aaKnown RBP21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 ABHD16BQ9H3Z7 469 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 BCAS3Q9H6U6 928 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 JPH1Q9HDC5 661 aaPredicted RBP21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 FLRT1Q9NZU1 646 aa21.22■□□□□ 0.99
PDLIM3-202ENST00000284770 CTAGE5O15320 804 aa21.21■□□□□ 0.99
PDLIM3-202ENST00000284770 CCNE2O96020 404 aa21.21■□□□□ 0.99
PDLIM3-202ENST00000284770 SPATA31C1P0DKV0 1188 aa21.21■□□□□ 0.99
PDLIM3-202ENST00000284770 PLCG1P19174 1290 aa21.21■□□□□ 0.99
PDLIM3-202ENST00000284770 STAT6P42226 847 aa21.21■□□□□ 0.99
PDLIM3-202ENST00000284770 CAP1Q01518 475 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms