RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CHP1Q99653 195 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 GUCA1BQ9UMX6 200 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 CAP2P40123 477 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 FXR2P51116 673 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 STAT2P52630 851 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 ECM1Q16610 540 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 TBC1D10BQ4KMP7 808 aaPredicted RBP20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 GOLGA6L1Q8N7Z2 621 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 SGIP1Q9BQI5 828 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 FBXO28Q9NVF7 368 aa20.31■□□□□ 0.84
PDLIM3-201ENST00000284767 PMS1P54277 932 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 PAPD7Q5XG87 772 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 TBC1D5Q92609 795 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 FAM204AQ9H8W3 233 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 BLOC1S4Q9NUP1 217 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 SAR1BQ9Y6B6 198 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 GMPSP49915 693 aaPredicted RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 CKAP4Q07065 602 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 ORC2Q13416 577 aaPredicted RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 BTNL9Q6UXG8 535 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 TRIM9Q9C026 710 aa20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 LUC7L2Q9Y383 392 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-201ENST00000284767 MARCH6O60337 910 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 TMEM266Q2M3C6 531 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 MICALL2Q8IY33 904 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 MB21D1Q8N884 522 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 SNX29Q8TEQ0 813 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 CALML4Q96GE6 196 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 EFCC1Q9HA90 598 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 RSPH14Q9UHP6 348 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 TTC26A0AVF1 554 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 LGALS16A8MUM7 142 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 TNNT3P45378 269 aaPredicted RBP20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 KRT83P78385 493 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 CAPN11Q9UMQ6 739 aa20.29■□□□□ 0.84
PDLIM3-201ENST00000284767 RNF40O75150 1001 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 ASIC1P78348 528 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 TBC1D12O60347 775 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 PHACTR2O75167 634 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 FCER1AP12319 257 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 TNIP1Q15025 636 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 LRRC31Q6UY01 552 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 AFAP1L1Q8TED9 768 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 TEPSINQ96N21 525 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 GOPCQ9HD26 462 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 TRIM10Q9UDY6 481 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 HPCAL4Q9UM19 191 aa20.28■□□□□ 0.84
PDLIM3-201ENST00000284767 SYF2O95926 243 aaKnown RBP20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 STAT3P40763 770 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 ARHGAP4P98171 946 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 CCDC125Q86Z20 511 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 IRF2BP1Q8IU81 584 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 ADSSL1Q8N142 457 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 CYP2W1Q8TAV3 490 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 VCPKMTQ9H867 229 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 PCDHA12Q9UN75 941 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
PDLIM3-201ENST00000284767 PRPF6O94906 941 aaKnown RBP20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 HERVK_113P62684 666 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 STK4Q13043 487 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 SEMA3FQ13275 785 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 PRR16Q569H4 304 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 CCDC122Q5T0U0 273 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 PRAMEF18Q5VWM3 479 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 DYMQ7RTS9 669 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 ZNF507Q8TCN5 953 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 MMS19Q96T76 1030 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 THAP9Q9H5L6 903 aa20.27■□□□□ 0.83
PDLIM3-201ENST00000284767 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 RHOBTB3O94955 611 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 ATP1A1P05023 1023 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 PTGER2P43116 358 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 PDE4DQ08499 809 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 MEA1Q16626 185 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 SLC30A10Q6XR72 485 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 COG1Q8WTW3 980 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 ZFP91Q96JP5 570 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 MYMKA6NI61 221 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 FAM86B1E9PN63 330 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 KRT86O43790 486 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 FAM86B2P0C5J1 330 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 MAGEA9P43362 315 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 ZNF280AP59817 542 aaPredicted RBP20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 KRT79Q5XKE5 535 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 CRYGNQ8WXF5 182 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 CUEDC2Q9H467 287 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
PDLIM3-201ENST00000284767 SPDYE3A6NKU9 549 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 ENC1O14682 589 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 CFBP00751 764 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms