RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RBP3P10745 1247 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 STT3AP46977 705 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 KIF11P52732 1056 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 GPLD1P80108 840 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 KANK3Q6NY19 840 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 LHFPL2Q6ZUX7 228 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ZSCAN30Q86W11 494 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 GIMAP8Q8ND71 665 aaPredicted RBP3.16□□□□□ -1.9
CHD1-201ENST00000284049 GLIS3Q8NEA6 775 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 DCAF4Q8WV16 495 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 ZBTB10Q96DT7 871 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 TBATAQ96M53 351 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 KIDINS220Q9ULH0 1771 aa3.16□□□□□ -1.9
CHD1-201ENST00000284049 TCRBV16S1A1N1A0A5B0 115 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 CAPN8A6NHC0 703 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 KDM1AO60341 852 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 TLR5O60602 858 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 KRT15P19012 456 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 RASSF7Q02833 373 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 C19orf57Q0VDD7 668 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SEPT7Q16181 437 aaKnown RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 GCC1Q96CN9 775 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 ERP27Q96DN0 273 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 TBC1D31Q96DN5 1066 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.15□□□□□ -1.91e-6■■■□□ 14.6
CHD1-201ENST00000284049 ARMT1Q9H993 441 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 PCDHB12Q9Y5F1 795 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 CBX4O00257 560 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SPINT1O43278 529 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 PAFAH1B1P43034 410 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 ARF3P61204 181 aaPredicted RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 ARF1P84077 181 aaKnown RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 PTPN11Q06124 597 aaPredicted RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 GTF2IRD2BQ6EKJ0 949 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 DYMQ7RTS9 669 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 GTF2IRD2Q86UP8 949 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 TEX11Q8IYF3 940 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 NDUFAF2Q8N183 169 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 LINC00528Q8N1L1 170 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SDR16C5Q8N3Y7 309 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SMC1BQ8NDV3 1235 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 ZNF566Q969W8 418 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SCLYQ96I15 445 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 CLUHP3Q96NS8 147 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 TRIM8Q9BZR9 551 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 SMG9Q9H0W8 520 aaKnown RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 MUC3BQ9H195 1237 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 ANLNQ9NQW6 1124 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 TOPORSQ9NS56 1045 aaPredicted RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 DNAJB12Q9NXW2 375 aaKnown RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 TRIM33Q9UPN9 1127 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 RRP7AQ9Y3A4 280 aaKnown RBP3.15□□□□□ -1.9
CHD1-201ENST00000284049 MYOM3Q5VTT5 1437 aa3.15□□□□□ -1.9
CHD1-201ENST00000284049 ZNF142P52746 1687 aaPredicted RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 FSD2A1L4K1 749 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 FANCGO15287 622 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TMCC2O75069 709 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TMEM127O75204 238 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 HMMRO75330 724 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 FSBPO95073 299 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 APOA4P06727 396 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 CNTFP26441 200 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 LMAN1P49257 510 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 INPP5AQ14642 412 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 ALDH1L2Q3SY69 923 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 FAM209BQ5JX69 171 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 RPAINQ86UA6 219 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TTC30BQ8N4P2 665 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 NGDNQ8NEJ9 315 aaKnown RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 DIS3LQ8TF46 1054 aaKnown RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 FBXW5Q969U6 566 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 C1GALT1C1Q96EU7 318 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 POP1Q99575 1024 aaKnown RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 KCNJ15Q99712 375 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 APEX2Q9UBZ4 518 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 RPS6KL1Q9Y6S9 549 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 BLACEA4D250 179 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 ABCB4P21439 1286 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 SP100P23497 879 aaPredicted RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 VEGFBP49765 207 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 PRKG2Q13237 762 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TRPC3Q13507 836 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 CCDC93Q567U6 631 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 WDR44Q5JSH3 913 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 MPRIPQ6WCQ1 1025 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TMEM102Q8N9M5 508 aaPredicted RBP3.15□□□□□ -1.91
CHD1-201ENST00000284049 ATG16L2Q8NAA4 619 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 GPBAR1Q8TDU6 330 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 ISCA1Q9BUE6 129 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 GPATCH2Q9NW75 528 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 A0A1W2PQU0 124 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 PTPDC1A2A3K4 754 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 SLC22A31A6NKX4 558 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 UPK3BL1B0FP48 263 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 UPK3BL2E5RIL1 263 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 KRIT1O00522 736 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 TPP1O14773 563 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 GNAT1P11488 350 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 SLC19A1P41440 591 aa3.15□□□□□ -1.91
CHD1-201ENST00000284049 PCBP4P57723 403 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms