RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 RBAK-RBAKDNI3L0D1 243 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 IPO5O00410 1097 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 IKBKBO14920 756 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 PLA2G4BP0C869 781 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 CIITAP33076 1130 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 NF2P35240 595 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 ZSCAN30Q86W11 494 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 CACTINQ8WUQ7 758 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 ARID3AQ99856 593 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 NMRK2Q9NPI5 230 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 EXOC1Q9NV70 894 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 SAMM50Q9Y512 469 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 TEX33O43247 280 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 CYP2C8P10632 490 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 TMEM119Q4V9L6 283 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 NOL9Q5SY16 702 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 EEPD1Q7L9B9 569 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 ANKRD13AQ8IZ07 590 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 TRIML1Q8N9V2 468 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 KIAA0895Q8NCT3 520 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 BHMT2Q9H2M3 363 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
GGPS1-201ENST00000282841 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.45
GGPS1-201ENST00000282841 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 CYP3A4P08684 503 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 TPM4P67936 248 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 ORC2Q13416 577 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-201ENST00000282841 PGM5Q15124 567 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 SARM1Q6SZW1 724 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 GRIN3BO60391 1043 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
GGPS1-201ENST00000282841 Q3C1V9 767 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 TKFCQ3LXA3 575 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 ARSHQ5FYA8 562 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 ENOX1Q8TC92 643 aaKnown RBP12.26□□□□□ -0.45
GGPS1-201ENST00000282841 IKZF4Q9H2S9 585 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 GINM1Q9NU53 330 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 RLFQ13129 1914 aa12.26□□□□□ -0.45
GGPS1-201ENST00000282841 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PES1O00541 588 aaKnown RBP12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PSMD10O75832 226 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PGK2P07205 417 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PAK1Q13153 545 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 MTMR1Q13613 665 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 MCF2L2Q86YR7 1114 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 NELFCDQ8IXH7 590 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 C12orf42Q96LP6 360 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 C7orf25Q9BPX7 421 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PYM1Q9BRP8 204 aaKnown RBP12.25□□□□□ -0.45
GGPS1-201ENST00000282841 TEX13BQ9BXU2 312 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 ASCC2Q9H1I8 757 aaPredicted RBP12.25□□□□□ -0.45
GGPS1-201ENST00000282841 VPS16Q9H269 839 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 HOXC10Q9NYD6 342 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 SLITRK3O94933 977 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 TRAF1Q13077 416 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 ERO1BQ86YB8 467 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 ANKRD35Q8N283 1001 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 FAM20AQ96MK3 541 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 PDCD2LQ9BRP1 358 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
GGPS1-201ENST00000282841 RHOBTB3O94955 611 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 ZNF18P17022 549 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 SPATA1Q5VX52 437 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 ANKRD40Q6AI12 368 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 MOXD1Q6UVY6 613 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 GIMAP8Q8ND71 665 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 DNAJC19Q96DA6 116 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 RUSC1Q9BVN2 902 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 TAB2Q9NYJ8 693 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 CYP39A1Q9NYL5 469 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 NR3C2P08235 984 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 SLC5A5Q92911 643 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 MRFAP1L1Q96HT8 127 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 TRIM47Q96LD4 638 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
GGPS1-201ENST00000282841 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 ADAMTS5Q9UNA0 930 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 ASTN1O14525 1302 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 TPM2P07951 284 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 CYP11B2P19099 503 aa12.24□□□□□ -0.45
GGPS1-201ENST00000282841 ERCC5P28715 1186 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms