RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 ANTXR2P58335 489 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-201ENST00000280154 FOXP4Q8IVH2 680 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-201ENST00000280154 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 GPCPD1Q9NPB8 672 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 SGTAO43765 313 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 TBCAO75347 108 aaKnown RBP10.48□□□□□ -0.73
PDCD4-201ENST00000280154 RAD17O75943 681 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 EGFRP00533 1210 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 SNHG28P0DPA3 235 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 HOXC13P31276 330 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 PPARAQ07869 468 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 KAZNQ674X7 775 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 PEX5LQ8IYB4 626 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 MMADHCQ9H3L0 296 aaPredicted RBP10.48□□□□□ -0.73
PDCD4-201ENST00000280154 CNNM2Q9H8M5 875 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 TSR3Q9UJK0 312 aaKnown RBP10.48□□□□□ -0.73
PDCD4-201ENST00000280154 PCDHAC2Q9Y5I4 1007 aa10.48□□□□□ -0.73
PDCD4-201ENST00000280154 BHMG1C9JSJ3 638 aaPredicted RBP10.47□□□□□ -0.73
PDCD4-201ENST00000280154 F8VZ95 297 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 PRKAB2O43741 272 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 RHOBTB3O94955 611 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 ABL1P00519 1130 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 LIFRP42702 1097 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 SEPHS1P49903 392 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 MRPS5P82675 430 aaKnown RBP10.47□□□□□ -0.73
PDCD4-201ENST00000280154 ZBTB17Q13105 803 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 VWA3BQ502W6 1294 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 TMEM151BQ8IW70 566 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 TRPM4Q8TD43 1214 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 JAKMIP2Q96AA8 810 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 NACC2Q96BF6 587 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 TRIM7Q9C029 511 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 TAF6LQ9Y6J9 622 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 E7EWF7 191 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 EPN2O95208 641 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 PDGFRBP09619 1106 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 STT3AP46977 705 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 RAPGEF1Q13905 1077 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 SMAD1Q15797 465 aaKnown RBP10.47□□□□□ -0.73
PDCD4-201ENST00000280154 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 PNMA8AQ86V59 439 aaPredicted RBP10.47□□□□□ -0.73
PDCD4-201ENST00000280154 CKAP2LQ8IYA6 745 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 EPSTI1Q96J88 318 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 STXBP3O00186 592 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 CUL4AQ13619 759 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 ISLR2Q6UXK2 745 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 DGKHQ86XP1 1220 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDCD4-201ENST00000280154 HACL1Q9UJ83 578 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 SLC4A4Q9Y6R1 1079 aa10.47□□□□□ -0.73
PDCD4-201ENST00000280154 PLA2G6O60733 806 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 MYBP10242 640 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 GUCY1A2P33402 732 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 TRDNQ13061 729 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 RABEP1Q15276 862 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 FILIP1LQ4L180 1135 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 RUFY3Q7L099 469 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 TEX11Q8IYF3 940 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 E2F7Q96AV8 911 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDCD4-201ENST00000280154 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-201ENST00000280154 G3V3G9 751 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 KLHL41O60662 606 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 RPS6KB1P23443 525 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 MRPS35P82673 323 aaKnown RBP10.46□□□□□ -0.73
PDCD4-201ENST00000280154 NFIAQ12857 509 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 PDCD2Q16342 344 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-201ENST00000280154 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 NEK1Q96PY6 1258 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 USP40Q9NVE5 1235 aa10.46□□□□□ -0.73
PDCD4-201ENST00000280154 NEDD4P46934 1319 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 EME2A4GXA9 379 aaPredicted RBP10.46□□□□□ -0.74
PDCD4-201ENST00000280154 NDUFV2P19404 249 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 KIF5BP33176 963 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 TATDN2Q93075 761 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 HHIPL1Q96JK4 782 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 NACAP1Q9BZK3 213 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.74
PDCD4-201ENST00000280154 TMEM98Q9Y2Y6 226 aa10.46□□□□□ -0.74
PDCD4-201ENST00000280154 FKBP1BP68106 108 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 DLGAP5Q15398 846 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 RCSD1Q6JBY9 416 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 CEP70Q8NHQ1 597 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 STK32AQ8WU08 396 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 PPP1R14BQ96C90 147 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 RMDN2Q96LZ7 410 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 PLXNB2O15031 1838 aa10.45□□□□□ -0.74
PDCD4-201ENST00000280154 ZSCAN22P10073 491 aaPredicted RBP10.45□□□□□ -0.74
PDCD4-201ENST00000280154 DESP17661 470 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms