RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 LRCH2Q5VUJ6 765 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 ABHD10Q9NUJ1 306 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 RNF181Q9P0P0 153 aa19.95■□□□□ 0.78
CAPN1-201ENST00000279247 MRPL11Q9Y3B7 192 aaKnown RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 CTDP1Q9Y5B0 961 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-201ENST00000279247 TULP1O00294 542 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-201ENST00000279247 ETF1P62495 437 aaKnown RBP19.94■□□□□ 0.78
CAPN1-201ENST00000279247 MYOCDQ8IZQ8 938 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 CCDC155Q8N6L0 562 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 PANX2Q96RD6 677 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 AGPAT5Q9NUQ2 364 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 FEM1BQ9UK73 627 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 DNM3Q9UQ16 869 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 SPATA31C1P0DKV0 1188 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 ARP10275 920 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 SLF1Q9BQI6 1058 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 FANCGO15287 622 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 ERVK-24P63145 666 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 Q4G0T1 1027 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 CENPPQ6IPU0 288 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 PURBQ96QR8 312 aaKnown RBP19.94■□□□□ 0.78
CAPN1-201ENST00000279247 WDR24Q96S15 920 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 WRNIP1Q96S55 665 aa19.94■□□□□ 0.78
CAPN1-201ENST00000279247 EIF2AK1Q9BQI3 630 aaKnown RBP19.94■□□□□ 0.78
CAPN1-201ENST00000279247 FAM207AQ9NSI2 230 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-201ENST00000279247 ARSHQ5FYA8 562 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 FAM160B2Q86V87 743 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 CCDC65Q8IXS2 484 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 ZNF710Q8N1W2 664 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 LRRN4CLQ8ND94 238 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 CCP110O43303 1012 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 GAS7O60861 476 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 MBOAT7Q96N66 472 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 LRRC27Q9C0I9 530 aa19.93■□□□□ 0.78
CAPN1-201ENST00000279247 LUC7L2Q9Y383 392 aaKnown RBP19.93■□□□□ 0.78
CAPN1-201ENST00000279247 ABL1P00519 1130 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 CCDC175P0C221 793 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 CASP5P51878 434 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 TRIM65Q6PJ69 517 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 IL31RAQ8NI17 732 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 WNK4Q96J92 1243 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 TFR2Q9UP52 801 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 IGLV3-22A0A075B6J6 115 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 LMNB1P20700 586 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 KCNJ6P48051 423 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 MMP14P50281 582 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 FAM114A1Q8IWE2 563 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 GUF1Q8N442 669 aaKnown RBP19.92■□□□□ 0.78
CAPN1-201ENST00000279247 DYDC2Q96IM9 177 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 COL20A1Q9P218 1284 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 VAV3Q9UKW4 847 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 DNM2P50570 870 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 ZNF280AP59817 542 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-201ENST00000279247 HSP90AA2PQ14568 343 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-201ENST00000279247 MAEAQ7L5Y9 396 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 PRPF38AQ8NAV1 312 aaKnown RBP19.92■□□□□ 0.78
CAPN1-201ENST00000279247 FAM20AQ96MK3 541 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 SH2D3AQ9BRG2 576 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 REEP2Q9BRK0 252 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 ZNF577Q9BSK1 485 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 MMRN2Q9H8L6 949 aa19.92■□□□□ 0.78
CAPN1-201ENST00000279247 PIK3CDO00329 1044 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 EIF2AK2P19525 551 aaKnown RBP19.91■□□□□ 0.78
CAPN1-201ENST00000279247 RPA1P27694 616 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 CCDC40Q4G0X9 1142 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 MUM1L1Q5H9M0 696 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 MOXD1Q6UVY6 613 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 SFR1Q86XK3 245 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 ZNF507Q8TCN5 953 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 TSG101Q99816 390 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 RPAP3Q9H6T3 665 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-201ENST00000279247 ADGRG1Q9Y653 693 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 KIF2AO00139 706 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-201ENST00000279247 VCAM1P19320 739 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 GTF2F1P35269 517 aaKnown RBP eCLIP19.91■□□□□ 0.784e-13■■■■□ 21.8
CAPN1-201ENST00000279247 HIRAP54198 1017 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-201ENST00000279247 SLC12A3P55017 1021 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 CEP55Q53EZ4 464 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 SMCR8Q8TEV9 937 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-201ENST00000279247 RUSC1Q9BVN2 902 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 ITIH6Q6UXX5 1313 aa19.91■□□□□ 0.78
CAPN1-201ENST00000279247 TSR1Q2NL82 804 aaKnown RBP19.9■□□□□ 0.78
CAPN1-201ENST00000279247 MIIPQ5JXC2 388 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 NOC3LQ8WTT2 800 aaKnown RBP19.9■□□□□ 0.78
CAPN1-201ENST00000279247 CRACR2AQ9BSW2 395 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 KCND1Q9NSA2 647 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 ZNF536O15090 1300 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 MYCLP12524 364 aaPredicted RBP19.9■□□□□ 0.78
CAPN1-201ENST00000279247 CIITAP33076 1130 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 FKBP15Q5T1M5 1219 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 EMILIN3Q9NT22 766 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 GGA3Q9NZ52 723 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 RABGAP1Q9Y3P9 1069 aa19.9■□□□□ 0.78
CAPN1-201ENST00000279247 PRPF6O94906 941 aaKnown RBP19.89■□□□□ 0.78
CAPN1-201ENST00000279247 HMGCS2P54868 508 aa19.89■□□□□ 0.78
CAPN1-201ENST00000279247 HYIQ5T013 277 aa19.89■□□□□ 0.78
CAPN1-201ENST00000279247 BANK1Q8NDB2 785 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms