RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CCL15Q16663 113 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
SSRP1-201ENST00000278412 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 EIF2AK1Q9BQI3 630 aaKnown RBP13.13□□□□□ -0.31
SSRP1-201ENST00000278412 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
SSRP1-201ENST00000278412 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 BECN2A8MW95 431 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 PDHXO00330 501 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 GAS7O60861 476 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 ASIC1P78348 528 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 STK4Q13043 487 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
SSRP1-201ENST00000278412 RAD54LQ92698 747 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 SP2Q02086 613 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 MTMR1Q13613 665 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 LRRC41Q15345 812 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 UGCGQ16739 394 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 TPH2Q8IWU9 490 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 PDLIM2Q96JY6 352 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 UBIAD1Q9Y5Z9 338 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SOWAHBA6NEL2 793 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 CCNE2O96020 404 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 IDEP14735 1019 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 PRCPP42785 496 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 GHRHRQ02643 423 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
SSRP1-201ENST00000278412 ARSHQ5FYA8 562 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 IKZF4Q9H2S9 585 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SLC39A2Q9NP94 309 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SFI1A8K8P3 1242 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SLITRK3O94933 977 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 DDX12PQ92771 950 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 FGD4Q96M96 766 aa13.12□□□□□ -0.31
SSRP1-201ENST00000278412 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
SSRP1-201ENST00000278412 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 C2orf69Q8N8R5 385 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 KIAA0895Q8NCT3 520 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 TRIM5Q9C035 493 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 OAZ1P54368 228 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 FAM20AQ96MK3 541 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
SSRP1-201ENST00000278412 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
SSRP1-201ENST00000278412 SMC2O95347 1197 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 TRAF1Q13077 416 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 SEPT14Q6ZU15 432 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
SSRP1-201ENST00000278412 DNAJC19Q96DA6 116 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 HSD17B14Q9BPX1 270 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 RAB34Q9BZG1 259 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
SSRP1-201ENST00000278412 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSRP1-201ENST00000278412 PDE4DQ08499 809 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 B3GNT9Q6UX72 402 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
SSRP1-201ENST00000278412 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
SSRP1-201ENST00000278412 TBX3O15119 743 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 CYP11B2P19099 503 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 RPA1P27694 616 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 ZNF75DP51815 510 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 SLC12A3P55017 1021 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 ERVK-24P63145 666 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
SSRP1-201ENST00000278412 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms