RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 IQCEQ6IPM2 695 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 CNOT6LQ96LI5 555 aaKnown RBP14.35□□□□□ -0.11
C9orf3-201ENST00000277198 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
C9orf3-201ENST00000277198 CSRNP1Q96S65 589 aa14.35□□□□□ -0.11
C9orf3-201ENST00000277198 DDX4Q9NQI0 724 aaKnown RBP14.35□□□□□ -0.11
C9orf3-201ENST00000277198 PES1O00541 588 aaKnown RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 CDK8P49336 464 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 USP14P54578 494 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 ASIC1P78348 528 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 SUPT20HL1Q3ZLR7 823 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 ANKRD40Q6AI12 368 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 CCDC84Q86UT8 332 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 NOC4LQ9BVI4 516 aaKnown RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 GJA5P36382 358 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 STK4Q13043 487 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 PDIA5Q14554 519 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 MCM6Q14566 821 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 CASP8Q14790 479 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 SV2BQ7L1I2 683 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 MIGA2Q7L4E1 593 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
C9orf3-201ENST00000277198 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 LRRC15Q8TF66 581 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 RUBCNQ92622 972 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 RIOX1Q9H6W3 641 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
C9orf3-201ENST00000277198 OTOFQ9HC10 1997 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 H3BQF6 201 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PRLRP16471 622 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 MTIF2P46199 727 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 TNNI2P48788 182 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 VAV2P52735 878 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 RHBDL3P58872 404 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 ITIH3Q06033 890 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 KIF5AQ12840 1032 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 HSP90B2PQ58FF3 399 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 UNC13DQ70J99 1090 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 NOA1Q8NC60 698 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 EDEM3Q9BZQ6 932 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PDE11AQ9HCR9 933 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 AGPAT5Q9NUQ2 364 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 HNRNPH2P55795 449 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 LRRC63Q05C16 580 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PSMD2Q13200 908 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 SPA17Q15506 151 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 TMEM266Q2M3C6 531 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 SH3BP5LQ7L8J4 393 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 MAPKAPK5Q8IW41 473 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 GUF1Q8N442 669 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 TRIM58Q8NG06 486 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.12
C9orf3-201ENST00000277198 PLIN4Q96Q06 1357 aa14.33□□□□□ -0.12
C9orf3-201ENST00000277198 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
C9orf3-201ENST00000277198 LCA5LO95447 670 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 TECP42680 631 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 PICALMQ13492 652 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 SEPT2Q15019 361 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 GOLGA5Q8TBA6 731 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 CCDC42Q96M95 316 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 PLIN2Q99541 437 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
C9orf3-201ENST00000277198 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
C9orf3-201ENST00000277198 ATP1A1P05023 1023 aaKnown RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 GOLGA8HP0CJ92 632 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 AARSP49588 968 aaKnown RBP eCLIP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 VGLL4Q14135 290 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 SLC4A8Q2Y0W8 1093 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 VWA3BQ502W6 1294 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 PPP1R18Q6NYC8 613 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 TEX11Q8IYF3 940 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 FAM151AQ8WW52 585 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 TRIM10Q9UDY6 481 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 JRKLQ9Y4A0 524 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms