RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 SESN3P58005 492 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 TUBB4BP68371 445 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 EXOC3L4Q17RC7 722 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 PDXDC2PQ6P474 469 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 CCDC174Q6PII3 467 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 ABCC12Q96J65 1359 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
SKP2-202ENST00000274255 ACSL3O95573 720 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 CORO7P57737 925 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 SEC23AQ15436 765 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 DPH6Q7L8W6 267 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 IRF2BP1Q8IU81 584 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 N4BP2L2Q92802 583 aaPredicted RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 FBXL5Q9UKA1 691 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 DIP2AQ14689 1571 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 GDF11O95390 407 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 SRGNP10124 158 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 FKBP3Q00688 224 aaKnown RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 ALX1Q15699 326 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 UAP1Q16222 522 aaPredicted RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 IKZF4Q9H2S9 585 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 TTI1O43156 1089 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 EXOC3O60645 756 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 H2AFZP0C0S5 128 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 H2AFVQ71UI9 128 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 GSTA5Q7RTV2 222 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 CCT8L2Q96SF2 557 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
SKP2-202ENST00000274255 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 HAUS2Q9NVX0 235 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 PCDHA1Q9Y5I3 950 aa12.49□□□□□ -0.41
SKP2-202ENST00000274255 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 RGS16O15492 202 aaPredicted RBP12.48□□□□□ -0.41
SKP2-202ENST00000274255 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 CDK8P49336 464 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 MRPL12P52815 198 aaKnown RBP12.48□□□□□ -0.41
SKP2-202ENST00000274255 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 GLG1Q92896 1179 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 YY1P25490 414 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 KCNH2Q12809 1159 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 TMEM132AQ24JP5 1023 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 BHMT2Q9H2M3 363 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 SLC37A4O43826 429 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 ITGA4P13612 1032 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 KRT5P13647 590 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 LSP1P33241 339 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 CTTNQ14247 550 aaKnown RBP12.48□□□□□ -0.41
SKP2-202ENST00000274255 NFIXQ14938 502 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 GRIK5Q16478 980 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 MCTP2Q6DN12 878 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 CCDC26Q8TAB7 109 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 PPP1R12CQ9BZL4 782 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 ODF2LQ9ULJ1 636 aa12.48□□□□□ -0.41
SKP2-202ENST00000274255 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 EIF3HO15372 352 aaKnown RBP eCLIP12.47□□□□□ -0.41
SKP2-202ENST00000274255 DUSP9Q99956 384 aaKnown RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 PSMD14O00487 310 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 EPB41P11171 864 aaKnown RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 KCNJ1P48048 391 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 FAM47EQ6ZV65 393 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 NLRP14Q86W24 1093 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 FAM167BQ9BTA0 163 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 SALL4Q9UJQ4 1053 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 ZNF263O14978 683 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 SART1O43290 800 aaKnown RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 C2CD6Q53TS8 623 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 GKAP1Q5VSY0 366 aaPredicted RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 CYP4F22Q6NT55 531 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 TMED8Q6PL24 325 aaPredicted RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 HS2ST1Q7LGA3 356 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 KCNK18Q7Z418 384 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
SKP2-202ENST00000274255 HNRNPLLQ8WVV9 542 aaKnown RBP12.47□□□□□ -0.41
SKP2-202ENST00000274255 ZC3H12CQ9C0D7 883 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms