RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 SEZ6LQ9BYH1 1024 aa20.2■□□□□ 0.82
SEC22C-202ENST00000273156 GNEQ9Y223 722 aaKnown RBP20.2■□□□□ 0.82
SEC22C-202ENST00000273156 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
SEC22C-202ENST00000273156 PCDHA1Q9Y5I3 950 aa20.2■□□□□ 0.82
SEC22C-202ENST00000273156 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
SEC22C-202ENST00000273156 CUTAO60888 179 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 PPP1R11O60927 126 aaPredicted RBP20.19■□□□□ 0.82
SEC22C-202ENST00000273156 ASGR1P07306 291 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 ZNF445P59923 1031 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 TAPT1Q6NXT6 567 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 TLK2Q86UE8 772 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 FBXO11Q86XK2 927 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
SEC22C-202ENST00000273156 KRI1Q8N9T8 703 aaKnown RBP20.19■□□□□ 0.82
SEC22C-202ENST00000273156 FSIP1Q8NA03 581 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 RASGRP4Q8TDF6 673 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 MRPS27Q92552 414 aaKnown RBP20.19■□□□□ 0.82
SEC22C-202ENST00000273156 CUL5Q93034 780 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 RIC8AQ9NPQ8 531 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
SEC22C-202ENST00000273156 SMCHD1A6NHR9 2005 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 ADAMTS3O15072 1205 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 ADCY6O43306 1168 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 PQBP1O60828 265 aaKnown RBP20.18■□□□□ 0.82
SEC22C-202ENST00000273156 CMA1P23946 247 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 PDE4DQ08499 809 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 NONOQ15233 471 aaKnown RBP eCLIP20.18■□□□□ 0.82
SEC22C-202ENST00000273156 FSCN1Q16658 493 aaKnown RBP20.18■□□□□ 0.82
SEC22C-202ENST00000273156 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 EEPD1Q7L9B9 569 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 FBXO16Q8IX29 292 aaPredicted RBP20.18■□□□□ 0.82
SEC22C-202ENST00000273156 DACT1Q9NYF0 836 aa20.18■□□□□ 0.82
SEC22C-202ENST00000273156 MYH15Q9Y2K3 1946 aa20.17■□□□□ 0.82
SEC22C-202ENST00000273156 A0A0U1RQG5 324 aaPredicted RBP20.17■□□□□ 0.82
SEC22C-202ENST00000273156 SMPD1P17405 629 aa20.17■□□□□ 0.82
SEC22C-202ENST00000273156 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
SEC22C-202ENST00000273156 PURBQ96QR8 312 aaKnown RBP20.17■□□□□ 0.82
SEC22C-202ENST00000273156 PSTPIP2Q9H939 334 aa20.17■□□□□ 0.82
SEC22C-202ENST00000273156 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 MYADML2A6NDP7 307 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 KIAA0355O15063 1070 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 DYNC1LI2O43237 492 aaPredicted RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 FAM160A1Q05DH4 1040 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 ZNF174Q15697 407 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 DUSP28Q4G0W2 176 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 TMEM39AQ9NV64 488 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 NKRFO15226 690 aaKnown RBP eCLIP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 NR1I2O75469 434 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 EDNRBP24530 442 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 BRDTQ58F21 947 aaPredicted RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 SAMD3Q8N6K7 520 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 NSUN6Q8TEA1 469 aaKnown RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 SCFD2Q8WU76 684 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 WDR11Q9BZH6 1224 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 NUP62CLQ9H1M0 184 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 PDGFCQ9NRA1 345 aa20.16■□□□□ 0.82
SEC22C-202ENST00000273156 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 SRPRBQ9Y5M8 271 aaKnown RBP20.16■□□□□ 0.82
SEC22C-202ENST00000273156 RBM47A0AV96 593 aaKnown RBP20.15■□□□□ 0.82
SEC22C-202ENST00000273156 SYCE3A1L190 88 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 TRIM43BA6NCK2 446 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 ARVCFO00192 962 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 CTAGE5O15320 804 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 RAG1P15918 1043 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 INF2Q27J81 1249 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 JAKMIP3Q5VZ66 844 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 MCTP2Q6DN12 878 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 ZNF579Q8NAF0 562 aaKnown RBP20.15■□□□□ 0.82
SEC22C-202ENST00000273156 TRIM43Q96BQ3 446 aaPredicted RBP20.15■□□□□ 0.82
SEC22C-202ENST00000273156 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
SEC22C-202ENST00000273156 FBXO2Q9UK22 296 aaPredicted RBP20.15■□□□□ 0.82
SEC22C-202ENST00000273156 GOLGA6L3A6NEY3 463 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 TLR3O15455 904 aaKnown RBP20.14■□□□□ 0.81
SEC22C-202ENST00000273156 KINO60870 393 aaKnown RBP20.14■□□□□ 0.81
SEC22C-202ENST00000273156 MCM7P33993 719 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 CPT1AP50416 773 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 CDK7P50613 346 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 TEX2Q8IWB9 1127 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 BADQ92934 168 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 GOLPH3LQ9H4A5 285 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 LAMA3Q16787 3333 aa20.14■□□□□ 0.81
SEC22C-202ENST00000273156 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 ATP2C1P98194 919 aaPredicted RBP20.13■□□□□ 0.81
SEC22C-202ENST00000273156 BEX3Q00994 111 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 FAAP100Q0VG06 881 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 PTGDRQ13258 359 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 LRSAM1Q6UWE0 723 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 NEK8Q86SG6 692 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 ENGASEQ8NFI3 743 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 CLSTN2Q9H4D0 955 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 ORC2Q13416 577 aaPredicted RBP20.13■□□□□ 0.81
SEC22C-202ENST00000273156 SNW1Q13573 536 aaKnown RBP20.13■□□□□ 0.81
SEC22C-202ENST00000273156 SYTL5Q8TDW5 730 aaPredicted RBP20.13■□□□□ 0.81
SEC22C-202ENST00000273156 TBCKQ8TEA7 893 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 CLIC6Q96NY7 704 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 TNMDQ9H2S6 317 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 FAM13BQ9NYF5 915 aa20.13■□□□□ 0.81
SEC22C-202ENST00000273156 SOX1O00570 391 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms