RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 PNMA6FA0A0J9YX94 578 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 POTEFA5A3E0 1075 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 TCP1P17987 556 aaKnown RBP11.19□□□□□ -0.62
CPNE9-201ENST00000273027 KLRK1P26718 216 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 OAS2P29728 719 aaKnown RBP11.19□□□□□ -0.62
CPNE9-201ENST00000273027 ADCY7P51828 1080 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 MRPL12P52815 198 aaKnown RBP11.19□□□□□ -0.62
CPNE9-201ENST00000273027 USP14P54578 494 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 TRAF1Q13077 416 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 CALCRLQ16602 461 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
CPNE9-201ENST00000273027 ACRBPQ8NEB7 543 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 ALS2CR12Q96Q35 445 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 SLF1Q9BQI6 1058 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
CPNE9-201ENST00000273027 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 GREB1LQ9C091 1923 aaPredicted RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 PJA2O43164 708 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 RPS6KA5O75582 802 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 IVLP07476 585 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 USP11P51784 963 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 WDR59Q6PJI9 974 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 MRIQ9BWK5 157 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 NHEJ1Q9H9Q4 299 aaPredicted RBP11.18□□□□□ -0.62
CPNE9-201ENST00000273027 GUCA1BQ9UMX6 200 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 DAAM1Q9Y4D1 1078 aa11.18□□□□□ -0.62
CPNE9-201ENST00000273027 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 A0A0U1RQG5 324 aaPredicted RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 TTLL1O95922 423 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 PDHBP11177 359 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 ANXA13P27216 316 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 AARSP49588 968 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 RHBDL3P58872 404 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 GABPAQ06546 454 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 MMGT1Q8N4V1 131 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 RAD54LQ92698 747 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 CUL5Q93034 780 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 SECISBP2LQ93073 1101 aaKnown RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 CHP1Q99653 195 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 IRX2Q9BZI1 471 aaPredicted RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 EHD4Q9H223 541 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 MTMR4Q9NYA4 1195 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 PUF60Q9UHX1 559 aaKnown RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
CPNE9-201ENST00000273027 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
CPNE9-201ENST00000273027 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 B4DLN1 442 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 TBX3O15119 743 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 SASH3O75995 380 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 UFL1O94874 794 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 SEC31AO94979 1220 aaKnown RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 HLA-DOAP06340 250 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 EN2P19622 333 aaPredicted RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 TECP42680 631 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 HERVK_113P62684 666 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 FKBP1AP62942 108 aaKnown RBP11.16□□□□□ -0.62
CPNE9-201ENST00000273027 EHHADHQ08426 723 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 SREBF2Q12772 1141 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 GRB10Q13322 594 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 PRKG1Q13976 671 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 MIIPQ5JXC2 388 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 FMNL3Q8IVF7 1028 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 MAPKAPK5Q8IW41 473 aa11.16□□□□□ -0.62
CPNE9-201ENST00000273027 CCDC65Q8IXS2 484 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms