RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 NNTQ13423 1086 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 DBN1Q16643 649 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 GBP7Q8N8V2 638 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 TTLL11Q8NHH1 800 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 BPIFA3Q9BQP9 254 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 SART1O43290 800 aaKnown RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 EIF3BP55884 814 aaKnown RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 UBXN2AP68543 259 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 MECOMQ03112 1051 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 ALCAMQ13740 583 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 USP14P54578 494 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 CUL4BQ13620 913 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 NPHP4O75161 1426 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 ADGRL3Q9HAR2 1447 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 MEIS1O00470 390 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 STAT2P52630 851 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 PRPSAP1Q14558 356 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 UBE2TQ9NPD8 197 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 TARBP1Q13395 1621 aaKnown RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 ADCY10Q96PN6 1610 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 A0A087WUV0 522 aaPredicted RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 GOLGA8QA0A0J9YX86 632 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 GOLGA8OA6NCC3 632 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 GOLGA8NF8WBI6 632 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 CTNND1O60716 968 aaKnown RBP11.07□□□□□ -0.64
LAMA3-201ENST00000269217 MCAMP43121 646 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 MXI1P50539 228 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 PDE1BQ01064 536 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 EMBQ6PCB8 327 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 NEK9Q8TD19 979 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
LAMA3-201ENST00000269217 TET3O43151 1660 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 GSTA1P08263 222 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 GSTA2P09210 222 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 CYP27A1Q02318 531 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 SNX1Q13596 522 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 CUL1Q13616 776 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 CCDC93Q567U6 631 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 FBXO38Q6PIJ6 1188 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 TMED8Q6PL24 325 aaPredicted RBP11.06□□□□□ -0.64
LAMA3-201ENST00000269217 EXOC8Q8IYI6 725 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 CCDC68Q9H2F9 335 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 PCIF1Q9H4Z3 704 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 IPO11Q9UI26 975 aaKnown RBP11.06□□□□□ -0.64
LAMA3-201ENST00000269217 OPHN1O60890 802 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 KRT1P04264 644 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 SERPINB2P05120 415 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 SESN3P58005 492 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
LAMA3-201ENST00000269217 MCF2LO15068 1137 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 ITKQ08881 620 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 ASPHQ12797 758 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 PLA2R1Q13018 1463 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 OATP04181 439 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 KRT3P12035 628 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 MSH2P43246 934 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 RCAN1P53805 252 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 SATB1Q01826 763 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 DNAJC24Q6P3W2 148 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 PI4KBQ9UBF8 816 aa11.06□□□□□ -0.64
LAMA3-201ENST00000269217 MED7O43513 233 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 PNMA6AP0CW24 399 aaPredicted RBP11.05□□□□□ -0.64
LAMA3-201ENST00000269217 NR1D1P20393 614 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 GCKP35557 465 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 CDK8P49336 464 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 CYP4F22Q6NT55 531 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 FMO2Q99518 471 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 HECW2Q9P2P5 1572 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
LAMA3-201ENST00000269217 CCDC188H7C350 402 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 GDF11O95390 407 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 ECE1P42892 770 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 BAG6P46379 1132 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 DR1Q01658 176 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 TMED2Q15363 201 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 UBE2SQ16763 222 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 GLE1Q53GS7 698 aaKnown RBP11.05□□□□□ -0.64
LAMA3-201ENST00000269217 UNC13DQ70J99 1090 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 HVCN1Q96D96 273 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 RFC1P35251 1148 aaPredicted RBP11.05□□□□□ -0.64
LAMA3-201ENST00000269217 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 FAM47CQ5HY64 1035 aa11.05□□□□□ -0.64
LAMA3-201ENST00000269217 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
LAMA3-201ENST00000269217 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms