RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 FAM26FQ5R3K3 315 aa18.62■□□□□ 0.57
RTN1-201ENST00000267484 IFT20Q8IY31 132 aa18.62■□□□□ 0.57
RTN1-201ENST00000267484 CAVIN3Q969G5 261 aa18.62■□□□□ 0.57
RTN1-201ENST00000267484 FKBP3Q00688 224 aaKnown RBP18.61■□□□□ 0.57
RTN1-201ENST00000267484 PIK3R5Q8WYR1 880 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 HAS1Q92839 578 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 SSU72P8A0A1W2PR75 194 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 GSTO1P78417 241 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 ALS2CLQ60I27 953 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 FAM107BQ9H098 131 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 CEP72Q9P209 647 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 RAD51CO43502 376 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 PPP1R11O60927 126 aaPredicted RBP18.61■□□□□ 0.57
RTN1-201ENST00000267484 ERLIN2O94905 339 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 SERPING1P05155 500 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 ZCWPW2Q504Y3 356 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 ICE2Q659A1 982 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 GDF3Q9NR23 364 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
RTN1-201ENST00000267484 SEC24CP53992 1094 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 KLHL30Q0D2K2 578 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 DDX42Q86XP3 938 aaKnown RBP eCLIP18.6■□□□□ 0.57
RTN1-201ENST00000267484 RIOX1Q9H6W3 641 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 DDX25Q9UHL0 483 aaKnown RBP18.6■□□□□ 0.57
RTN1-201ENST00000267484 KIAA1024Q9UPX6 916 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
RTN1-201ENST00000267484 RAD21O60216 631 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 NAB2Q15742 525 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 TMEM119Q4V9L6 283 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 IQCKQ8N0W5 287 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 OR2W6PQ8NHA6 318 aa18.6■□□□□ 0.57
RTN1-201ENST00000267484 POTEB3A0JP26 581 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 POTECB2RU33 542 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 POTEBQ6S5H4 581 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 COL16A1Q07092 1604 aaPredicted RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 KCNK3O14649 394 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 STAT3P40763 770 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 GTF2A1P52655 376 aaPredicted RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 GBP6Q6ZN66 633 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 RNF10Q8N5U6 811 aaKnown RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 RAB34Q9BZG1 259 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 ZNF287Q9HBT7 754 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 RIC8AQ9NPQ8 531 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 EPB41P11171 864 aaKnown RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 AKR1B1P15121 316 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 HPDP32754 393 aaPredicted RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 HLTFQ14527 1009 aaKnown RBP eCLIP18.59■□□□□ 0.57
RTN1-201ENST00000267484 FAM98CQ17RN3 349 aaKnown RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 MAATS1Q7Z4T9 603 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
RTN1-201ENST00000267484 AP1M1Q9BXS5 423 aa18.59■□□□□ 0.57
RTN1-201ENST00000267484 F8W031 263 aaPredicted RBP18.58■□□□□ 0.57
RTN1-201ENST00000267484 LDHCP07864 332 aa18.58■□□□□ 0.57
RTN1-201ENST00000267484 PAK2Q13177 524 aa18.58■□□□□ 0.57
RTN1-201ENST00000267484 SLC18A3Q16572 532 aa18.58■□□□□ 0.57
RTN1-201ENST00000267484 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.57
RTN1-201ENST00000267484 RBAK-RBAKDNI3L0D1 243 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 MEI1Q5TIA1 1274 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
RTN1-201ENST00000267484 ZNF804AQ7Z570 1209 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 BCAS3Q9H6U6 928 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 SLC9A1P19634 815 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 RHBDL3P58872 404 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 GPSM2P81274 684 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 SCFD1Q8WVM8 642 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 PCDHA12Q9UN75 941 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 DDX60LQ5H9U9 1706 aaKnown RBP18.58■□□□□ 0.56
RTN1-201ENST00000267484 NAV1Q8NEY1 1877 aa18.58■□□□□ 0.56
RTN1-201ENST00000267484 ABCB11O95342 1321 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 EPS15P42566 896 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 CASP5P51878 434 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 SKOR1P84550 965 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 PDIA5Q14554 519 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 KCTD1Q719H9 257 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 GPBP1Q86WP2 473 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 JMJD4Q9H9V9 463 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 ESYT2A0FGR8 921 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L15C9J2P7 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L13C9JLJ4 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L11C9JVI0 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L18D6R9N7 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L22D6RA61 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L17D6RBQ6 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L19D6RCP7 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L20D6RJB6 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 UFL1O94874 794 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 PTK2Q05397 1052 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L24Q0WX57 530 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 ADAM9Q13443 819 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 MFSD14BQ5SR56 506 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 CEP85LQ5SZL2 805 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 USP17L6PQ6QN14 398 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 TRIM59Q8IWR1 403 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
RTN1-201ENST00000267484 IPO4Q8TEX9 1081 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms