RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 ZNF446Q9NWS9 450 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 PCDHA4Q9UN74 947 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 CLTAP09496 248 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 SMARCA1P28370 1054 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 CDC42EP5Q6NZY7 148 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 INTS8Q75QN2 995 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 CROCCP2Q86T23 111 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 PSMD1Q99460 953 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 STIM2Q9P246 746 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 CHUKO15111 745 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 N4BP1O75113 896 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 FLOT1O75955 427 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 CDC25AP30304 524 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 PCK1P35558 622 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 FMR1Q06787 632 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 INF2Q27J81 1249 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 RAD9BQ6WBX8 426 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 MTUS1Q9ULD2 1270 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 LAD1O00515 517 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 FDPSP14324 419 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 RASA1P20936 1047 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 UIMC1Q96RL1 719 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 VIPAS39Q9H9C1 493 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 KRIT1O00522 736 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 MOCS3O95396 460 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 SEC23AQ15436 765 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-201ENST00000266546 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RGS16O15492 202 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RPSAP08865 295 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 TAOK1Q7L7X3 1001 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 PLCB1Q9NQ66 1216 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RPS12P25398 132 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 PTPROQ16827 1216 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 C6orf163Q5TEZ5 329 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 DENND2CQ68D51 928 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RASGRP2Q7LDG7 609 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 N4BP2L2Q92802 583 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 CEP95Q96GE4 821 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 TACO1Q9BSH4 297 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RAB17Q9H0T7 212 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 AS3MTQ9HBK9 375 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 SLC39A2Q9NP94 309 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 ZNF831Q5JPB2 1677 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 P2RX5Q93086 422 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 EHD4Q9H223 541 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 ATP5DP30049 168 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 CORO7P57737 925 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 LMNTD2Q8IXW0 634 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 DDX12PQ92771 950 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 LSM14BQ9BX40 385 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 ACTR5Q9H9F9 607 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
CLSTN3-201ENST00000266546 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 NR1I3Q14994 352 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 SYCE1Q8N0S2 351 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
CLSTN3-201ENST00000266546 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms