RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 KCNK16Q96T55 309 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 TRIM62Q9BVG3 475 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 SBNO2Q9Y2G9 1366 aa5.87□□□□□ -1.47
XRN1-201ENST00000264951 F6X3S4 739 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 MTRF1O75570 445 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 MYO1DO94832 1006 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PPP2R5CQ13362 524 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 ZNF174Q15697 407 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TBC1D9BQ66K14 1250 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 SPOPLQ6IQ16 392 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 EFL1Q7Z2Z2 1120 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 SNRKQ9NRH2 765 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 ZBTB40Q9NUA8 1239 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 NSMCE4AQ9NXX6 385 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 MAP3K15Q6ZN16 1313 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 M0R3G1 203 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 WBP4O75554 376 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 ATXN3P54252 364 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 MAN2A1Q16706 1144 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 KRT40Q6A162 431 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PARP9Q8IXQ6 854 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 HIC2Q96JB3 615 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 SPTLC3Q9NUV7 552 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 ARPP21Q9UBL0 812 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 ZFP69BQ9UJL9 534 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 SMG5Q9UPR3 1016 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 TRAPPC8Q9Y2L5 1435 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 NUP62P37198 522 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.86□□□□□ -1.47
XRN1-201ENST00000264951 FAM210AQ96ND0 272 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 LSG1Q9H089 658 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 TMEM206Q9H813 350 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 SAC3D1A6NKF1 404 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 H7C0C1 242 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 RPN1P04843 607 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 ATP5OP48047 213 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 KCNJ6P48051 423 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 C20orf194Q5TEA3 1177 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 BSPRYQ5W0U4 402 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 NUGGCQ68CJ6 796 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TRIM67Q6ZTA4 783 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PICK1Q9NRD5 415 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 POLR3EQ9NVU0 708 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TRAF3IP3Q9Y228 551 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 HSPA4LO95757 839 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 HLA-DPA1P20036 260 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 DR1Q01658 176 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TFDP2Q14188 446 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 CRYMQ14894 314 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 GAS7O60861 476 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 S100A9P06702 114 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 SLC1A4P43007 532 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 LRRC63Q05C16 580 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TSC22D1Q15714 1073 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 CNGA3Q16281 694 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TJAP1Q5JTD0 557 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TLK2Q86UE8 772 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 KBTBD3Q8NAB2 608 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 MRPL48Q96GC5 212 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 CDHR1Q96JP9 859 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 RRAGDQ9NQL2 400 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 IRAK4Q9NWZ3 460 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 UTP6Q9NYH9 597 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 GMNCA6NCL1 334 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 COPEO14579 308 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 TJP3O95049 919 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 RFC4P35249 363 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 IL1RL1Q01638 556 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 WASHC5Q12768 1159 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 CSTF3Q12996 717 aaKnown RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 AKAP4Q5JQC9 854 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PIK3R2O00459 728 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PNMA6AP0CW24 399 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 TCF3P15923 654 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 ORC2Q13416 577 aaPredicted RBP5.86□□□□□ -1.47
XRN1-201ENST00000264951 RASGRF1Q13972 1273 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 PIK3AP1Q6ZUJ8 805 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 BBS7Q8IWZ6 715 aa5.86□□□□□ -1.47
XRN1-201ENST00000264951 RGS12O14924 1447 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 KANSL1LA0AUZ9 987 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 SPDYE16A6NNV3 312 aaPredicted RBP5.85□□□□□ -1.47
XRN1-201ENST00000264951 LZTS3O60299 673 aaPredicted RBP5.85□□□□□ -1.47
XRN1-201ENST00000264951 ZBED4O75132 1171 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 DDAH1O94760 285 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 PMLP29590 882 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 CASP2P42575 452 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 EHHADHQ08426 723 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 TNFAIP1Q13829 316 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 SPDYE2Q495Y8 402 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 FAM26FQ5R3K3 315 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 TMCO4Q5TGY1 634 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 TRAF7Q6Q0C0 670 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 SYDE1Q6ZW31 735 aaPredicted RBP5.85□□□□□ -1.47
XRN1-201ENST00000264951 PLD3Q8IV08 490 aa5.85□□□□□ -1.47
XRN1-201ENST00000264951 NR1H4Q96RI1 486 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms