RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RNF8O76064 485 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 MB21D2Q8IYB1 491 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 CRB1P82279 1406 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PCCAP05165 728 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 DNAJC7Q99615 494 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 ALCAMQ13740 583 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PTGISQ16647 500 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 NDUFA13Q9P0J0 144 aa12.66□□□□□ -0.38
DNMT3A-201ENST00000264709 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 ABLIM1O14639 778 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 ADAM9Q13443 819 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 NOVA2Q9UNW9 492 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 GCP02774 474 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 EFHD1Q9BUP0 239 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 TNFRSF8P28908 595 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 SERPINB4P48594 390 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 KRT39Q6A163 491 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 ACADSP16219 412 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 FIGNQ5HY92 759 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 NUGGCQ68CJ6 796 aa12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 USP15Q9Y4E8 981 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-201ENST00000264709 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.39
DNMT3A-201ENST00000264709 STMN1P16949 149 aa12.65□□□□□ -0.39
DNMT3A-201ENST00000264709 ICA1Q05084 483 aa12.65□□□□□ -0.39
DNMT3A-201ENST00000264709 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.39
DNMT3A-201ENST00000264709 MGARPQ8TDB4 240 aa12.65□□□□□ -0.39
DNMT3A-201ENST00000264709 PLTPP55058 493 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 GUF1Q8N442 669 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 PTPRUQ92729 1446 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 EXOC1LA0A1B0GW35 172 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 FGGP02679 453 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 GPTP24298 496 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.391e-5■■■■□ 25.7
DNMT3A-201ENST00000264709 NR2F2P24468 414 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 IFNAR2P48551 515 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 POLR2FP61218 127 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 OSBPL1AQ9BXW6 950 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 ZAP70P43403 619 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 TRMT10CQ7L0Y3 403 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 EXOC5O00471 708 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 TRIM65Q6PJ69 517 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 SERPINI1Q99574 410 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 VPS37BQ9H9H4 285 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 NDE1Q9NXR1 346 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 GCNT4Q9P109 453 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 SYDE1Q6ZW31 735 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 PRPF38AQ8NAV1 312 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 SALL3Q9BXA9 1300 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 YWHAEP62258 255 aaKnown RBP12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
DNMT3A-201ENST00000264709 TMEM110-MUSTN1A8MSY1 372 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 LRRC31Q6UY01 552 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 CDH16O75309 829 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKRD20A8PQ5CZ79 823 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKRD20A2Q5SQ80 823 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKRD20A1Q5TYW2 823 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 NRBF2Q96F24 287 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 EXOC3O60645 756 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 AFPP02771 609 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ATP2C1P98194 919 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ETNK1Q9HBU6 452 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 GYPCP04921 128 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 GOLGA8FQ08AF8 430 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 GOLGA8DPQ0D2H9 430 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms