RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 KCNK3O14649 394 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 DNA2P51530 1060 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 USP11P51784 963 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 FKBP3Q00688 224 aaKnown RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 SATB1Q01826 763 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 GRM4Q14833 912 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 SLMAPQ14BN4 828 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 CRELD2Q6UXH1 353 aaPredicted RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 CCDC197Q8NCU1 140 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 TBC1D22AQ8WUA7 517 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 CCT6BQ92526 530 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 NOVA2Q9UNW9 492 aaKnown RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 NMT2O60551 498 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 PDHBP11177 359 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 KLHL30Q0D2K2 578 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 UAP1Q16222 522 aaPredicted RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 HEATR3Q7Z4Q2 680 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 HOOK3Q86VS8 718 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 CEP63Q96MT8 703 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 PSMD1Q99460 953 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 AIPL1Q9NZN9 384 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 ASAP1Q9ULH1 1129 aa13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
CHMP2B-201ENST00000263780 STXBP3O00186 592 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CEP104O60308 925 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CCNT1O60563 726 aaKnown RBP13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 KIF4AO95239 1232 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 SCP2P22307 547 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 GNA11P29992 359 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CHRNDQ07001 517 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 KCNMA1Q12791 1236 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 SEPT2Q15019 361 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 ASIC2Q16515 512 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CFAP73A6NFT4 308 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 TRIM37O94972 964 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 SSBP05455 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 DRD4P21917 467 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 TMOD1P28289 359 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 ECHS1P30084 290 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 QPCTQ16769 361 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 LETM2Q2VYF4 491 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 PNMA1Q8ND90 353 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 C6orf50Q9HD87 102 aa13.57□□□□□ -0.24
CHMP2B-201ENST00000263780 PPP1R12AO14974 1030 aaPredicted RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ANXA13P27216 316 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TECP42680 631 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 RIPK1Q13546 671 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ITIH4Q14624 930 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TRADDQ15628 312 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 PPP2R5EQ16537 467 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TLDC1Q6P9B6 456 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 MYOCDQ8IZQ8 938 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ATP8B3O60423 1300 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 MYMKA6NI61 221 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 NKRFO15226 690 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ASAP2O43150 1006 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 TLR2O60603 784 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 ZPR1O75312 459 aa13.56□□□□□ -0.24
CHMP2B-201ENST00000263780 PIGBQ92521 554 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms